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RESULTS SUMMARY
View contig list
Total sequences analysed = 4741
Sequences sorted into 1632 contigs and 0 singletons
Total SNPs detected = 16264
Total consensus size = 1173735 bp
SNP frequency = 1.39/100 bp
Smallest contig = 2 sequences
Total transitions = 5875
Total transversions = 9117
Total indels = 1272
1084 contigs containing 2 sequences
956(88.19)% of these contigs contain snps
with a total of 7554 snps
197 contigs containing 3 sequences
196(99.49)% of these contigs contain snps
with a total of 4381 snps
184 contigs containing 4 sequences
184(100.00)% of these contigs contain snps
with a total of 3761 snps
52 contigs containing 5 sequences
24(46.15)% of these contigs contain snps
with a total of 184 snps
52 contigs containing 6 sequences
32(61.54)% of these contigs contain snps
with a total of 238 snps
19 contigs containing 7 sequences
8(42.11)% of these contigs contain snps
with a total of 26 snps
12 contigs containing 8 sequences
5(41.67)% of these contigs contain snps
with a total of 24 snps
4 contigs containing 9 sequences
1(25.00)% of these contigs contain snps
with a total of 17 snps
5 contigs containing 10 sequences
1(20.00)% of these contigs contain snps
with a total of 4 snps
5 contigs containing 11 sequences
1(20.00)% of these contigs contain snps
with a total of 3 snps
3 contigs containing 12 sequences
2(66.67)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 13 sequences
(0.00)% of these contigs contain snps
4 contigs containing 14 sequences
3(75.00)% of these contigs contain snps
with a total of 50 snps
3 contigs containing 16 sequences
1(33.33)% of these contigs contain snps
with a total of 4 snps
2 contigs containing 17 sequences
(0.00)% of these contigs contain snps
1 contigs containing 18 sequences
(0.00)% of these contigs contain snps
1 contigs containing 19 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 21 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 27 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 32 sequences
1(100.00)% of these contigs contain snps
with a total of 9 snps
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| ©
2008 Bioinformatics centre,IISR,Calicut. Acknowledged to Plant Biotechnology Centre
Australia, DPI Comments/suggestions to DISC disc@spices.res.in Best viewed at 800x600+ | ||||||||||||||||||||||||||