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RESULTS SUMMARY
View contig list
Total sequences analysed = 10475
Sequences sorted into 2972 contigs and 0 singletons
Total SNPs detected = 19171
Total consensus size = 2332434 bp
SNP frequency = 0.82/100 bp
Smallest contig = 2 sequences
Total transitions = 6845
Total transversions = 10402
Total indels = 1924
1844 contigs containing 2 sequences
1592(86.33)% of these contigs contain snps
with a total of 9064 snps
284 contigs containing 3 sequences
279(98.24)% of these contigs contain snps
with a total of 3739 snps
333 contigs containing 4 sequences
333(100.00)% of these contigs contain snps
with a total of 4952 snps
132 contigs containing 5 sequences
68(51.52)% of these contigs contain snps
with a total of 345 snps
114 contigs containing 6 sequences
85(74.56)% of these contigs contain snps
with a total of 719 snps
57 contigs containing 7 sequences
10(17.54)% of these contigs contain snps
with a total of 35 snps
44 contigs containing 8 sequences
11(25.00)% of these contigs contain snps
with a total of 45 snps
29 contigs containing 9 sequences
1(3.45)% of these contigs contain snps
with a total of 5 snps
23 contigs containing 10 sequences
6(26.09)% of these contigs contain snps
with a total of 31 snps
18 contigs containing 11 sequences
8(44.44)% of these contigs contain snps
with a total of 30 snps
21 contigs containing 12 sequences
8(38.10)% of these contigs contain snps
with a total of 36 snps
7 contigs containing 13 sequences
(0.00)% of these contigs contain snps
9 contigs containing 14 sequences
5(55.56)% of these contigs contain snps
with a total of 14 snps
3 contigs containing 15 sequences
1(33.33)% of these contigs contain snps
with a total of 3 snps
6 contigs containing 16 sequences
2(33.33)% of these contigs contain snps
with a total of 3 snps
8 contigs containing 17 sequences
3(37.50)% of these contigs contain snps
with a total of 5 snps
7 contigs containing 18 sequences
1(14.29)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 19 sequences
2(100.00)% of these contigs contain snps
with a total of 2 snps
3 contigs containing 20 sequences
(0.00)% of these contigs contain snps
1 contigs containing 21 sequences
(0.00)% of these contigs contain snps
7 contigs containing 22 sequences
2(28.57)% of these contigs contain snps
with a total of 23 snps
3 contigs containing 23 sequences
(0.00)% of these contigs contain snps
2 contigs containing 24 sequences
1(50.00)% of these contigs contain snps
with a total of 12 snps
2 contigs containing 25 sequences
1(50.00)% of these contigs contain snps
with a total of 5 snps
1 contigs containing 27 sequences
1(100.00)% of these contigs contain snps
with a total of 13 snps
1 contigs containing 29 sequences
1(100.00)% of these contigs contain snps
with a total of 5 snps
3 contigs containing 31 sequences
2(66.67)% of these contigs contain snps
with a total of 16 snps
1 contigs containing 32 sequences
1(100.00)% of these contigs contain snps
with a total of 5 snps
1 contigs containing 36 sequences
(0.00)% of these contigs contain snps
2 contigs containing 42 sequences
2(100.00)% of these contigs contain snps
with a total of 5 snps
1 contigs containing 43 sequences
1(100.00)% of these contigs contain snps
with a total of 10 snps
1 contigs containing 47 sequences
1(100.00)% of these contigs contain snps
with a total of 25 snps
1 contigs containing 50 sequences
1(100.00)% of these contigs contain snps
with a total of 11 snps
1 contigs containing 66 sequences
1(100.00)% of these contigs contain snps
with a total of 12 snps
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| ©
2008 Bioinformatics centre,IISR,Calicut. Acknowledged to Plant Biotechnology Centre
Australia, DPI Comments/suggestions to DISC disc@spices.res.in Best viewed at 800x600+ |
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