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RESULTS SUMMARY
View contig list
Total sequences analysed = 10123
Sequences sorted into 2921 contigs and 0 singletons
Total SNPs detected = 28809
Total consensus size = 2668324 bp
SNP frequency = 1.08/100 bp
Smallest contig = 2 sequences
Total transitions = 13433
Total transversions = 12249
Total indels = 3127
1737 contigs containing 2 sequences
1392(80.14)% of these contigs contain snps
with a total of 9160 snps
366 contigs containing 3 sequences
357(97.54)% of these contigs contain snps
with a total of 8820 snps
312 contigs containing 4 sequences
305(97.76)% of these contigs contain snps
with a total of 8172 snps
137 contigs containing 5 sequences
78(56.93)% of these contigs contain snps
with a total of 845 snps
103 contigs containing 6 sequences
71(68.93)% of these contigs contain snps
with a total of 970 snps
78 contigs containing 7 sequences
18(23.08)% of these contigs contain snps
with a total of 154 snps
38 contigs containing 8 sequences
17(44.74)% of these contigs contain snps
with a total of 179 snps
26 contigs containing 9 sequences
4(15.38)% of these contigs contain snps
with a total of 32 snps
21 contigs containing 10 sequences
7(33.33)% of these contigs contain snps
with a total of 24 snps
18 contigs containing 11 sequences
9(50.00)% of these contigs contain snps
with a total of 78 snps
15 contigs containing 12 sequences
7(46.67)% of these contigs contain snps
with a total of 47 snps
15 contigs containing 13 sequences
6(40.00)% of these contigs contain snps
with a total of 64 snps
12 contigs containing 14 sequences
6(50.00)% of these contigs contain snps
with a total of 54 snps
4 contigs containing 15 sequences
(0.00)% of these contigs contain snps
11 contigs containing 16 sequences
5(45.45)% of these contigs contain snps
with a total of 33 snps
2 contigs containing 17 sequences
(0.00)% of these contigs contain snps
3 contigs containing 18 sequences
(0.00)% of these contigs contain snps
2 contigs containing 19 sequences
2(100.00)% of these contigs contain snps
with a total of 13 snps
2 contigs containing 20 sequences
1(50.00)% of these contigs contain snps
with a total of 5 snps
2 contigs containing 22 sequences
1(50.00)% of these contigs contain snps
with a total of 6 snps
3 contigs containing 23 sequences
2(66.67)% of these contigs contain snps
with a total of 13 snps
1 contigs containing 24 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 25 sequences
1(100.00)% of these contigs contain snps
with a total of 9 snps
2 contigs containing 26 sequences
2(100.00)% of these contigs contain snps
with a total of 18 snps
2 contigs containing 27 sequences
2(100.00)% of these contigs contain snps
with a total of 9 snps
1 contigs containing 28 sequences
1(100.00)% of these contigs contain snps
with a total of 14 snps
1 contigs containing 33 sequences
1(100.00)% of these contigs contain snps
with a total of 11 snps
1 contigs containing 34 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 35 sequences
1(100.00)% of these contigs contain snps
with a total of 6 snps
1 contigs containing 36 sequences
1(100.00)% of these contigs contain snps
with a total of 7 snps
1 contigs containing 38 sequences
1(100.00)% of these contigs contain snps
with a total of 29 snps
1 contigs containing 41 sequences
1(100.00)% of these contigs contain snps
with a total of 31 snps
1 contigs containing 50 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
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| ©
2008 Bioinformatics centre,IISR,Calicut. Acknowledged to Plant Biotechnology Centre
Australia, DPI Comments/suggestions to DISC disc@spices.res.in Best viewed at 800x600+ |
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