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RESULTS SUMMARY
View contig list
Total sequences analysed = 11307
Sequences sorted into 2660 contigs and 0 singletons
Total SNPs detected = 16046
Total consensus size = 2555383 bp
SNP frequency = 0.63/100 bp
Smallest contig = 2 sequences
Total transitions = 6805
Total transversions = 7258
Total indels = 1983
1589 contigs containing 2 sequences
1153(72.56)% of these contigs contain snps
with a total of 5773 snps
277 contigs containing 3 sequences
267(96.39)% of these contigs contain snps
with a total of 3961 snps
318 contigs containing 4 sequences
304(95.60)% of these contigs contain snps
with a total of 4739 snps
96 contigs containing 5 sequences
44(45.83)% of these contigs contain snps
with a total of 235 snps
102 contigs containing 6 sequences
76(74.51)% of these contigs contain snps
with a total of 627 snps
43 contigs containing 7 sequences
14(32.56)% of these contigs contain snps
with a total of 58 snps
44 contigs containing 8 sequences
11(25.00)% of these contigs contain snps
with a total of 65 snps
26 contigs containing 9 sequences
3(11.54)% of these contigs contain snps
with a total of 8 snps
19 contigs containing 10 sequences
2(10.53)% of these contigs contain snps
with a total of 24 snps
13 contigs containing 11 sequences
7(53.85)% of these contigs contain snps
with a total of 30 snps
19 contigs containing 12 sequences
4(21.05)% of these contigs contain snps
with a total of 22 snps
13 contigs containing 13 sequences
6(46.15)% of these contigs contain snps
with a total of 30 snps
13 contigs containing 14 sequences
3(23.08)% of these contigs contain snps
with a total of 11 snps
3 contigs containing 15 sequences
1(33.33)% of these contigs contain snps
with a total of 11 snps
12 contigs containing 16 sequences
5(41.67)% of these contigs contain snps
with a total of 19 snps
4 contigs containing 17 sequences
1(25.00)% of these contigs contain snps
with a total of 12 snps
4 contigs containing 18 sequences
1(25.00)% of these contigs contain snps
with a total of 21 snps
8 contigs containing 19 sequences
2(25.00)% of these contigs contain snps
with a total of 13 snps
2 contigs containing 20 sequences
1(50.00)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 21 sequences
(0.00)% of these contigs contain snps
3 contigs containing 22 sequences
1(33.33)% of these contigs contain snps
with a total of 1 snps
3 contigs containing 23 sequences
1(33.33)% of these contigs contain snps
with a total of 15 snps
5 contigs containing 24 sequences
3(60.00)% of these contigs contain snps
with a total of 20 snps
1 contigs containing 25 sequences
(0.00)% of these contigs contain snps
2 contigs containing 26 sequences
1(50.00)% of these contigs contain snps
with a total of 2 snps
4 contigs containing 27 sequences
4(100.00)% of these contigs contain snps
with a total of 30 snps
2 contigs containing 28 sequences
2(100.00)% of these contigs contain snps
with a total of 9 snps
1 contigs containing 29 sequences
(0.00)% of these contigs contain snps
2 contigs containing 32 sequences
2(100.00)% of these contigs contain snps
with a total of 21 snps
1 contigs containing 33 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 34 sequences
1(100.00)% of these contigs contain snps
with a total of 15 snps
1 contigs containing 35 sequences
1(100.00)% of these contigs contain snps
with a total of 7 snps
2 contigs containing 36 sequences
2(100.00)% of these contigs contain snps
with a total of 15 snps
3 contigs containing 38 sequences
2(66.67)% of these contigs contain snps
with a total of 12 snps
1 contigs containing 39 sequences
1(100.00)% of these contigs contain snps
with a total of 6 snps
1 contigs containing 40 sequences
1(100.00)% of these contigs contain snps
with a total of 7 snps
1 contigs containing 41 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 42 sequences
1(100.00)% of these contigs contain snps
with a total of 6 snps
1 contigs containing 45 sequences
1(100.00)% of these contigs contain snps
with a total of 10 snps
1 contigs containing 48 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 49 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
2 contigs containing 50 sequences
2(100.00)% of these contigs contain snps
with a total of 20 snps
1 contigs containing 52 sequences
1(100.00)% of these contigs contain snps
with a total of 25 snps
1 contigs containing 61 sequences
1(100.00)% of these contigs contain snps
with a total of 15 snps
1 contigs containing 64 sequences
1(100.00)% of these contigs contain snps
with a total of 13 snps
2 contigs containing 66 sequences
1(50.00)% of these contigs contain snps
with a total of 6 snps
1 contigs containing 67 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 80 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 83 sequences
1(100.00)% of these contigs contain snps
with a total of 20 snps
1 contigs containing 119 sequences
1(100.00)% of these contigs contain snps
with a total of 13 snps
1 contigs containing 120 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 141 sequences
1(100.00)% of these contigs contain snps
with a total of 11 snps
1 contigs containing 156 sequences
1(100.00)% of these contigs contain snps
with a total of 13 snps
1 contigs containing 168 sequences
1(100.00)% of these contigs contain snps
with a total of 28 snps
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| ©
2008 Bioinformatics centre,IISR,Calicut. Acknowledged to Plant Biotechnology Centre
Australia, DPI Comments/suggestions to DISC disc@spices.res.in Best viewed at 800x600+ |
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