| |
|
||||||||||||
RESULTS SUMMARY
View contig list
Total sequences analysed = 5909
Sequences sorted into 1774 contigs and 0 singletons
Total SNPs detected = 13841
Total consensus size = 1326902 bp
SNP frequency = 1.04/100 bp
Smallest contig = 2 sequences
Total transitions = 5617
Total transversions = 6990
Total indels = 1234
1244 contigs containing 2 sequences
1091(87.70)% of these contigs contain snps
with a total of 6601 snps
139 contigs containing 3 sequences
136(97.84)% of these contigs contain snps
with a total of 2796 snps
172 contigs containing 4 sequences
172(100.00)% of these contigs contain snps
with a total of 3559 snps
43 contigs containing 5 sequences
24(55.81)% of these contigs contain snps
with a total of 252 snps
56 contigs containing 6 sequences
42(75.00)% of these contigs contain snps
with a total of 282 snps
19 contigs containing 7 sequences
7(36.84)% of these contigs contain snps
with a total of 25 snps
17 contigs containing 8 sequences
9(52.94)% of these contigs contain snps
with a total of 32 snps
13 contigs containing 9 sequences
1(7.69)% of these contigs contain snps
with a total of 5 snps
9 contigs containing 10 sequences
5(55.56)% of these contigs contain snps
with a total of 35 snps
7 contigs containing 11 sequences
4(57.14)% of these contigs contain snps
with a total of 5 snps
5 contigs containing 12 sequences
3(60.00)% of these contigs contain snps
with a total of 26 snps
7 contigs containing 13 sequences
1(14.29)% of these contigs contain snps
with a total of 25 snps
7 contigs containing 14 sequences
2(28.57)% of these contigs contain snps
with a total of 19 snps
6 contigs containing 15 sequences
2(33.33)% of these contigs contain snps
with a total of 11 snps
4 contigs containing 16 sequences
2(50.00)% of these contigs contain snps
with a total of 10 snps
2 contigs containing 18 sequences
(0.00)% of these contigs contain snps
4 contigs containing 20 sequences
2(50.00)% of these contigs contain snps
with a total of 2 snps
2 contigs containing 21 sequences
2(100.00)% of these contigs contain snps
with a total of 10 snps
2 contigs containing 23 sequences
2(100.00)% of these contigs contain snps
with a total of 24 snps
2 contigs containing 24 sequences
(0.00)% of these contigs contain snps
2 contigs containing 25 sequences
1(50.00)% of these contigs contain snps
with a total of 21 snps
3 contigs containing 26 sequences
2(66.67)% of these contigs contain snps
with a total of 23 snps
1 contigs containing 27 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 29 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 30 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 34 sequences
1(100.00)% of these contigs contain snps
with a total of 18 snps
1 contigs containing 39 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 41 sequences
1(100.00)% of these contigs contain snps
with a total of 5 snps
2 contigs containing 62 sequences
2(100.00)% of these contigs contain snps
with a total of 22 snps
1 contigs containing 105 sequences
1(100.00)% of these contigs contain snps
with a total of 16 snps
|
|
||||||||||||||||||||||||||
| ©
2008 Bioinformatics centre,IISR,Calicut. Acknowledged to Plant Biotechnology Centre
Australia, DPI Comments/suggestions to DISC disc@spices.res.in Best viewed at 800x600+ |
||||||||||||||||||||||||||