Cucumber mosaic virus

Family   : Bromoviridae
Genus : Cucumovirus
Acronym : CMV

Introduction

Cucumber mosaic virus (CMV) is a plant pathogenic virus which infects many plants and causes quantity and quality losses. In fact it has the reputation of having the widest host range of any known plant virus. It is a tripartite positive sense single stranded RNA virus with isometric particle morphology. CMV strains are classified into two groups - I and II. The group I is further divided into IA and IB. The virus is known to occur both in temperate and tropical regions. Banana infectious chlorosis virus, Coleus mosaic virus, Cowpea banding mosaic virus, Cowpea ringspot virus, Cucumber virus 1, Lily ringspot virus, Pea top necrosis virus, Peanut yellow mosaic virus, Southern celery mosaic virus, Soybean stunt virus, Spinach blight virus, Tomato fern leaf virus, Pea western ringspot virus are few strains present.

Major Diseases

Mosaic disease

Geographical Distribution

Wide spread in India.

Particle Morphology

Isometric virus particles measuring about 29 nm in diameter.

Transmission Method

Transmitted by more than 60 species of aphids including Acyrthosiphon pisum, Aphis craccivora and Myzus persicae (Aphididae) in a non persistant manner. Virus is also transmitted by mechanical inoculation and in a few hosts, virus is also transmitted through seeds.

Detection

ELISA, RT-PCR, Real-time RT-PCR, LAMP, DIBA and Dot blot Hybridisation

Host Range and Symptomatology

Tomato and vegetablesVein clearing, mosaic and chlorotic local lesions.
Gladiolus plantsMosaic, color breaking, stunting and reduction in flower size.
Pisum sativum (pea) ,Phaseolus vulgaris (French bean) ,Psophocarpus tetragonolobus (winged bean) Mosaic, leaf deformation and stunting.
Piper nigrum (Black pepper) Mosaic and leaf distortion.
Solanaceous hostsMosaic, leaf distortion and stunting.
Vanilla planifolia Andrews (vanilla) Mosaic, leaf deformation and stunting.
Tagetes erecta (marigold) Severe puckering and blistering of leaf lamina.
Nicotiana tabacum L. (bidi tobacco) Chlorotic mottling.
Nicandra physaloides (winter cherry) Mosaic and leaf distortion
Bougainvillea glabraLMosaic mottling, stunting of plants with few small flowers.

References

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Sequences

Complete Sequence
 JN692495.1 Cucumber mosaic virus isolate Gerbera segment RNA3, complete sequence.
 GU111229.1 Cucumber mosaic virus isolate New Delhi segment RNA3, complete sequence.
 GU111228.1 Cucumber mosaic virus isolate New Delhi segment RNA2, complete sequence.
 GU111227.1 Cucumber mosaic virus isolate New Delhi segment RNA1, complete sequence.
 EF153733.1 Cucumber mosaic virus isolate Lucknow segment RNA3, complete sequence.
 EU642567.2 Cucumber mosaic virus isolate Aligarh segment RNA3, complete sequence.
 EF593025.1 Cucumber mosaic virus isolate Rauvolfia segment RNA3, complete sequence.
 EF593024.1 Cucumber mosaic virus isolate Datura segment RNA3, complete sequence.
 EF593023.1 Cucumber mosaic virus isolate Amaranthus segment RNA3, complete sequence.
 EF178298.1 Cucumber mosaic virus isolate Lucknow-Gmt segment RNA3, complete sequence.
 EF593026.1 Cucumber mosaic virus isolate Jatropha segment RNA3, complete sequence.
 DQ656120.2 Cucumber mosaic virus isolate chrysanthemum segment RNA3 5' UTR; and movement protein gene, complete cds.
 GU906293.2 Cucumber mosaic virus clone KKG-K segment RNA3, complete sequence.
 KM272278.1 Cucumber mosaic virus strain KO segment RNA2, complete sequence.
 KM272277.1 Cucumber mosaic virus strain KO segment RNA1, complete sequence.
 KM272276.1 Cucumber mosaic virus strain KP segment RNA3, complete sequence.
 KM272275.1 Cucumber mosaic virus strain KO segment RNA3, complete sequence.
 EF153734.2 Cucumber mosaic virus isolate Lucknow segment RNA3, complete sequence.
 HQ343232.2 Cucumber mosaic virus clone KKG-MP segment RNA3, complete sequence.
 JN642676.1 Cucumber mosaic virus isolate Petunia-Lucknow segment RNA3, complete sequence.
 HG917911.1 Cucumber mosaic virus RdRp, segment RNA2, isolate Palampur, complete genome.
 HG917910.1 Cucumber mosaic virus, segment RNA3, isolate Palampur, complete genome.
 HG917909.1 Cucumber mosaic virus, segment RNA1, isolate Palampur, complete genome.
Partial Sequence
 AF350450.1 Cucumber mosaic virus coat protein gene, complete cds.
 KT447515.1 Cucumber mosaic virus isolate CMV-Ban-Gangtok coat protein gene, complete cds.
 KR922819.1 Cucumber mosaic virus isolate AK-CMV-3 coat protein gene, complete cds.
 KP177963.1 Cucumber mosaic virus clone AK-CMV-2 coat protein-like (CP) gene, complete sequence.
 KP713797.1 Cucumber mosaic virus clone G-10 coat protein (CP) gene, complete cds.
 KP713798.1 Cucumber mosaic virus clone G-4 coat protein (CP) gene, complete cds.
 KP713799.1 Cucumber mosaic virus clone Ad-1 coat protein (CP) gene, complete cds.
 KP713800.1 Cucumber mosaic virus clone Ad-4 coat protein (CP) gene, complete cds.
 KP698590.1 Cucumber mosaic virus clone KKG-Am-1 coat protein (CP) gene, complete cds.
 KP698589.1 Cucumber mosaic virus clone KKG-HF-1 coat protein (CP) gene, complete cds.
 KP698588.1 Cucumber mosaic virus clone KKG-AC-1 coat protein-like (CP) gene, complete sequence.
 LN649264.1 Cucumber mosaic virus CP gene for Coat protein, isolate Palampur.
 KJ620411.1 UNVERIFIED: Cucumber mosaic virus coat protein-like gene, partial sequence.
 KF129062.1 Cucumber mosaic virus isolate Jasmine coat protein gene, complete cds.
 HG425124.1 Cucumber mosaic virus CP gene for coat protein, isolate Valeriana.
 JX995139.1 Cucumber mosaic virus isolate Pune coat protein gene, partial cds.
 JX913531.1 Cucumber mosaic virus isolate Gerbera Zing. coat protein gene, complete cds.
 JX888093.1 Cucumber mosaic virus isolate Gerbera Silves coat protein gene, complete cds.
 JX888092.1 Cucumber mosaic virus isolate Gerbera 2b protein gene, complete cds.
 JX026954.1 Cucumber mosaic virus isolate MP O5052012 movement protein gene, complete cds.
 JQ779842.1 Cucumber mosaic virus from Oxalis corymbosa capsid protein gene, complete cds.
 HE613667.1 Cucumber mosaic virus segment RNA2, genomic RNA, isolate Palampur.
 JF798579.1 Cucumber mosaic virus isolate Petunia-Lucknow movement protein (3a) gene, complete cds.
 JF798578.1 Cucumber mosaic virus isolate Petunia-Lucknow coat protein gene, complete cds.
 JF798577.1 Cucumber mosaic virus isolate Petunia-Lucknow long distance movement protein (2b) gene, complete cds.
 JF682239.1 Cucumber mosaic virus isolate Lucknow coat protein gene, complete cds.
 JF682238.1 Cucumber mosaic virus isolate Lucknow movement protein (3a) gene, complete cds.
 JF682237.1 Cucumber mosaic virus isolate Lucknow coat protein gene, complete cds.
 GQ844888.1 Cucumber mosaic virus isolate Br-Nar.2 coat protein (CP) gene, complete cds.
 FJ168035.1 Cucumber mosaic virus isolate CMV-Ch-Ada coat protein (CP) gene, complete cds.
 FJ168034.1 Cucumber mosaic virus isolate CMV-Ch-Gon coat protein (CP) gene, complete cds.
 HM447641.1 Cucumber mosaic virus isolate CMV MP-Tom movement protein gene, partial cds.
 HM447640.1 Cucumber mosaic virus isolate CMV MP-Tage movement protein gene, partial cds.
 HM447639.1 Cucumber mosaic virus isolate CMV MP-Chil movement protein gene, partial cds.
 HM447638.1 Cucumber mosaic virus isolate CMV MP-Br2 movement protein gene, partial cds.
 HM447637.1 Cucumber mosaic virus isolate CMV MP-Br1 movement protein gene, partial cds.
 HM447636.1 Cucumber mosaic virus isolate CMV MP-B2 movement protein gene, partial cds.
 HM447635.1 Cucumber mosaic virus isolate CMV MP-B1 movement protein gene, partial cds.
 HM484375.1 Cucumber mosaic virus isolate Lucknow (U.P.) coat protein gene, complete cds.
 HM143913.1 Cucumber mosaic virus isolate Lucknow 2b protein (2b) gene, complete cds.
 HM348786.1 Cucumber mosaic virus isolate chil coat protein gene, complete cds.
 HM348785.1 Cucumber mosaic virus isolate BR1 coat protein gene, complete cds.
 HM348784.1 Cucumber mosaic virus isolate B2 coat protein gene, complete cds.
 HM348783.1 Cucumber mosaic virus isolate B1 coat protein gene, complete cds.
 DQ914877.1 Cucumber mosaic virus from Rauvolfia serpentina coat protein gene, complete cds.
 DQ295914.1 Cucumber mosaic virus clone VKD 00369 coat protein gene, complete cds.
 EF187825.1 Cucumber mosaic virus isolate Lucknow coat protein gene, partial cds.
 EU888910.1 Cucumber mosaic virus 2b protein gene, complete cds.
 EU573928.1 Cucumber mosaic virus isolate Lucknow-SKR coat protein (CP) mRNA, complete cds.
 EU600216.1 Cucumber mosaic virus from Ocimum sanctum capsid protein gene, complete cds.
 EU600215.1 Cucumber mosaic virus from Salvia splendens capsid protein gene, complete cds.
 EU600214.1 Cucumber mosaic virus from Daucus carota capsid protein gene, complete cds.
 EU516322.1 Cucumber mosaic virus isolate Lucknow RNA-dependent RNA polymerase 2a gene, partial cds.
 EU450890.1 Cucumber mosaic virus isolate Lucknow 2a protein gene, partial cds; and 2b long distance movement protein gene, complete cds.
 EU417842.1 Cucumber mosaic virus isolate Lucknow long distance movement protein (2b) mRNA, complete cds.
 EU140547.1 Cucumber mosaic virus clone akil-p-1 capsid protein gene, complete cds.
 EU118810.1 Cucumber mosaic virus long distance movement protein (2b) gene, complete cds.
 EU118809.1 Cucumber mosaic virus 1a protein (1a) gene, partial cds.
 EF583882.1 Cucumber mosaic virus isolate Calicut coat protein gene, complete cds.
 EF710773.1 Cucumber mosaic virus clone DP-2b1 long distance movement protein gene, complete cds.
 EF153739.1 Cucumber mosaic virus isolate Jatropha coat protein gene, complete cds.
 EF153737.1 Cucumber mosaic virus isolate J&K coat protein gene, complete cds.
 EF153736.1 Cucumber mosaic virus isolate Lucknow capsid protein gene, complete cds.
 EF014278.1 Cucumber mosaic virus from India segment RNA3 intercistronic region genomic sequence.
 DQ914878.1 Cucumber mosaic virus from Rauvolfia serpentina movement protein gene, complete cds.
 DQ910858.1 Cucumber mosaic virus isolate Lucknow coat protein gene, complete cds.
 DQ885889.1 Cucumber mosaic virus strain Banana movement protein gene, complete cds.
 DQ885887.1 Cucumber mosaic virus strain Tom-shoestring movement protein gene, complete cds.
 AY754359.1 Cucumber mosaic virus isolate Kerala coat protein gene, complete cds.
 GU253913.1 Cucumber mosaic virus coat protein gene, complete cds.
 GQ227493.1 Cucumber mosaic virus isolate Imphal 2a protein gene, partial cds; and 2b protein gene, complete cds.
 GQ227492.1 Cucumber mosaic virus isolate New Delhi movement protein gene, complete cds.
 EU128723.1 Cucumber mosaic virus isolate TRY coat protein mRNA, complete cds.
 EU159528.2 Cucumber mosaic virus isolate Lucknow 1a protein gene, complete cds.
 FN555197.1 Cucumber mosaic virus partial 2a gene and 2b gene for gene silencing suppressor, genomic RNA, isolate AN.
 FN433600.1 Cucumber mosaic virus partial 2a gene for replicase protein, genomic RNA, isolate Palampur.
 EU310928.1 Cucumber mosaic virus isolate CIMAP-India C18 coat protein gene, complete cds.
 DQ873411.1 Cucumber mosaic virus isolate Datura movement protein gene, complete cds.
 DQ640743.1 Cucumber mosaic virus strain CMV-Maharastra coat protein (CP) gene, complete cds.
 AJ585086.3 Cucumber mosaic virus CP gene for coat protein, Indian isolate, genomic RNA.
 AJ810260.1 Cucumber mosaic Virus cp gene for coat protein, genomic RNA, isolate AN.
 JF279606.1 Cucumber mosaic virus isolate Tfr-In segment RNA-3, complete sequence.
 JF279609.1 Cucumber mosaic virus isolate Bal-In capsid protein (CP) gene, complete cds.
 JF279607.1 Cucumber mosaic virus isolate Ban-In capsid protein (CP) gene, partial cds.
 AY545924.1 Cucumber mosaic virus coat protein mRNA, complete cds.
 AY690621.1 Cucumber mosaic virus coat protein gene, complete cds.
 KJ874248.1 Cucumber mosaic virus isolate TN TNAU SG1 movement protein (ORF3a) and coat protein (ORF3b) genes, complete cds.
 KJ778898.1 Cucumber mosaic virus isolate TN TNAU SG1 protein 2a and protein 2b genes, complete cds.
 KJ013532.1 Cucumber mosaic virus isolate TN CBE Datura coat protein gene, complete cds.
 KF891359.1 Cucumber mosaic virus isolate TN TNAU SG1 coat protein (ORF3b) gene, complete cds.
 KF891356.1 Cucumber mosaic virus isolate TN TNAU SG1 protein 1a (ORF1a) gene, complete cds.
 KF891362.1 Cucumber mosaic virus isolate TN TNAU SG1 movement protein (ORF3a) gene, complete cds.
 DQ285569.1 Cucumber mosaic virus from India coat protein gene, complete cds.
 AY690620.1 Cucumber mosaic virus coat protein gene, complete cds.
 JX570737.1 Cucumber mosaic virus isolate Lucknow coat protein gene, complete cds.
 JX570732.1 Cucumber mosaic virus isolate Lucknow coat protein gene, complete cds.
 EF194273.1 Cucumber mosaic virus from Jatropha curcus movement protein 3a gene, complete cds.
 DQ152254.1 Cucumber mosaic virus strain banana coat protein gene, complete cds.
 EU531469.1 Cucumber mosaic virus isolate Jalgon coat protein gene, complete cds.
 DQ642019.1 Cucumber mosaic virus strain CMV-Maharastra 3a movement protein gene, complete cds.
 KJ645895.1 Cucumber mosaic virus isolate TN Chilli CMV 1 coat protein (ORF 3b) mRNA, complete cds.
 KJ874250.1 Cucumber mosaic virus isolate TN NGK BoG 1 movement protein (ORF3a) and coat protein (ORF3b) genes, complete cds.
 KJ778900.1 Cucumber mosaic virus isolate TN NGK BoG 1 protein 2a and protein 2b genes, complete cds.
 KF891361.1 Cucumber mosaic virus isolate TN NGK BoG1 coat protein (ORF3b) gene, complete cds.
 KF891358.1 Cucumber mosaic virus isolate TN NGK BoG1 protein 1a (ORF1a) gene, complete cds.
 KF891364.1 Cucumber mosaic virus isolate TN NGK BoG1 movement protein (ORF3a) gene, complete cds.
 JF279605.1 Cucumber mosaic virus isolate Tss-In segment RNA-3, complete sequence.
 EU006067.1 Cucumber mosaic virus 2b protein gene, complete cds.
 KJ645897.1 Cucumber mosaic virus isolate TN Chilli CMV 3 coat protein (ORF 3b) mRNA, complete cds.
 JF279608.1 Cucumber mosaic virus isolate Pun-In capsid protein (CP) gene, complete cds.
 KJ645896.1 Cucumber mosaic virus isolate TN Chilli CMV 2 coat protein (ORF 3b) mRNA, complete cds.
 KJ874249.1 Cucumber mosaic virus isolate TN TNV SG1 movement protein (ORF3a) and coat protein (ORF3b) genes, complete cds.
 KJ778899.1 Cucumber mosaic virus isolate TN TNV SG1 protein 2a and protein 2b genes, complete cds.
 KF891360.1 Cucumber mosaic virus isolate TN TNV SG1 coat protein (ORF3b) gene, complete cds.
 KF891357.1 Cucumber mosaic virus isolate TN TNV SG1 protein 1a (ORF1a) gene, complete cds.
 KF891363.1 Cucumber mosaic virus isolate TN TNV SG1 movement protein (ORF3a) gene, complete cds.
 EU531468.1 Cucumber mosaic virus isolate TRY coat protein gene, complete cds.
 DQ642017.1 Cucumber mosaic virus strain CMV-UP 3a movement protein gene, complete cds.
 HE650150.1 Cucumber mosaic virus 1a gene for replicase, segment RNA1, genomic RNA, isolate Palampur.
 AJ890465.2 Cucumber mosaic virus CP gene for coat protein, genomic RNA, specific host Lilium tigrinum.
 AJ890464.2 Cucumber mosaic virus CP gene for coat protein, genomic RNA, specific host Oriental Lily.
 AM040193.1 Cucumber mosaic virus CP gene for coat protein, genomic RNA.
 AJ831578.3 Cucumber mosaic virus segment RNA 3 complete sequence.
 AJ865382.2 Cucumber mosaic virus segment RNA 2 complete sequence.
 AJ843169.2 Cucumber mosaic virus partial 3a gene for movement protein, genomic RNA.
 AJ831579.2 Cucumber mosaic virus ORF3a, genomic RNA, specific host Lily Asiatic Hybrid cv. Romano.
 AJ831577.2 Cucumber mosaic virus ORF3a, genomic RNA, specific host Oriental Hybrid lily, clone 424.
 AJ831396.1 Cucumber mosaic virus segment RNA2 gene for 2b protein, clone 2, genomic RNA.
 AJ831395.1 Cucumber mosaic virus segment RNA2 gene for 2b protein, clone 1, genomic RNA.
 AJ635302.1 Cucumber mosaic virus partial cp gene for coat protein, genomic RNA.
 AJ635301.1 Cucumber mosaic virus partial cp gene for coat protein, genomic RNA.
 AJ634532.1 Cucumber mosaic virus segment RNA3 partial cp gene for coat protein and partial intercistronic region, genomic RNA.
 AJ558162.1 Cucumber mosaic virus 3a-cp intercistronic region, genomic RNA, isolate Indian1.
 AJ582650.1 Cucumber mosaic virus partial CP gene for coat protein, genomic RNA.
 AJ866272.1 Cucumber mosaic virus CP gene for coat protein, isolate gera-1.
 AM055602.1 Cucumber mosaic virus CP gene for coat protein, genomic RNA, specific host Musa x paradisiaca (banana).
 AJ564331.1 Cucumber Mosaic Virus partial cp gene for coat protein, genomic segment RNA3, clone E75.
 HG965235.1 Cucumber mosaic virus MP gene for Movement protein, segment RNA3, isolate Palampur.
 HG965234.1 Cucumber mosaic virus CP gene for Coat protein, segment RNA3, isolate Palampur.
 HG316105.1 Cucumber mosaic virus CP gene for coat protein, isolate Lily2.
 HG316104.1 Cucumber mosaic virus CP gene for coat protein, isolate Lily1.
 HE583224.2 Cucumber mosaic virus 3a gene for movement protein and cp gene for coat protein, segment RNA-3, isolate Palampur, genomic RNA.
 FN651789.1 Cucumber mosaic virus partial segment RNA-1, ATP-dependent helicase domain, isolate Palampur, genomic RNA.
 AM396984.1 Cucumber mosaic virus partial CP gene for coat protein, specific host Valeriana jatamansi.
 AM396983.1 Cucumber mosaic virus CP gene for coat protein, specific host Tagetes erecta.
 AM396982.1 Cucumber mosaic virus MP gene for movement protein, specific host Tagetes erecta.
 AM117572.1 Cucumber mosaic virus 3a gene for movement protein, genomic RNA.
 AJ937278.1 Cucumber mosaic virus cp gene for coat protein, genomic RNA, isolate 2.
 AJ866769.1 Cucumber mosaic virus 2b gene for 2b protein, genomic RNA, specific host Lily Asiatic Hybrid cv. Romano.
 AJ579918.1 Cucumber mosaic virus partial CP gene for coat protein, genomic RNA, isolate India.
 HG965236.1 Cucumber mosaic virus MP gene for Movement protein, segment RNA3, isolate Palampur (Billing).
 HG965232.2 Cucumber mosaic virus CP gene for Coat protein, isolate Ghatasni.
 HG965233.1 Cucumber mosaic virus MP gene for Movement protein, isolate Ghatasni.
 FM209498.1 Cucumber mosaic virus partial cp gene for coat protein, isolate Palampur, clone K2, genomic RNA.
 FM209497.1 Cucumber mosaic virus partial cp gene for coat protein, isolate Palampur, clone K1, genomic RNA.
 FN436275.1 Cucumber mosaic virus partial 1a gene, segment RNA1, isolate Palampur.
 FR821516.1 Cucumber mosaic virus 2b gene, genomic RNA, clone Cuc1.
 AM158321.1 Cucumber mosaic virus CP gene for coat protein, genomic RNA, isolate UP.
 AF414078.1 Cucumber mosaic virus movement protein mRNA, complete cds.
 AF281864.1 Cucumber mosaic virus coat protein mRNA, complete cds.
 AF198622.2 Cucumber mosaic virus coat protein (3b) gene, complete cds.
 DQ642018.1 Cucumber mosaic virus strain CMV-Karnataka 3a movement protein gene, complete cds.
 AY125575.1 Cucumber mosaic virus coat protein gene, complete cds.
 AF541918.2 Cucumber mosaic virus coat protein gene, partial cds.
 DQ141675.1 Cucumber mosaic virus coat protein gene, complete cds.
 DQ028777.2 Cucumber mosaic virus coat protein gene, complete cds.
 AJ879490.2 Cucumber mosaic virus segment RNA 1 complete sequence.
 AJ745092.1 Cucumber mosaic virus partial gene for coat protein, genomic RNA, isolate orn.
 AJ271416.1 cucumber mosaic virus cp gene for coat protein, strain 2A1-A.
 X89652.1 Cucumber Mosaic Virus (CMV) RNA for capsid protein gene.