Sri Lankan cassava mosaic virus

Family   : Geminiviridae
Genus : Begomovirus
Acronym : SLCMV

Introduction

In addition to the association of Indian cassava mosaic virus, widespread occurrence of Sri Lankan cassava mosaic virus is found with cassava mosaic disease.

Major Diseases

Mosaic disease

Geographical Distribution

Widespread in India

Particle Morphology

Geminate particles

Transmission Method

By whitefly, Bemisia tabaci

Detection

PCR

Host Range and Symptomatology

CassavaMosaic, leaf distortion, leaf narrowing, stunting of plants
ChilliMosaic

References

1 Ashish Srivastava ; Kumar, S. ; Meraj Jaidi ; Raj, S. K., Molecular characterization of a new begomovirus associated with leaf yellow mosaic disease of Jatropha curcas in India.. 2015, Archives of Virology, 160, 5, pp 1359-1362.
2 Borah, B. K. ; Cheema, G. S. ; Gill, C. K. ; Dasgupta, I., A geminivirus-satellite complex is associated with leaf deformity of mentha (mint) plants in Punjab.. 2010, Indian Journal of Virology, 21, 2, pp 103-109.
3 Borah, B. K. ; Indranil Dasgupta, PCR-RFLP analysis indicates that recombination might be a common occurrence among the cassava infecting begomoviruses in India.. 2012, Virus Genes, 45, 2, pp 327-332.
4 Dutt, N. ; Briddon, R. W. ; Dasgupta, I., Identification of a second begomovirus, Sri Lankan cassava mosaic virus, causing cassava mosaic disease in India.. 2005, Archives of Virology, 150, 10, pp 2101-2108.
5 Indranil Dasgupta, Cassava mosaic disease.. 2008, Characterization, diagnosis & management of plant viruses. Volume 1: industrial crops, 10, pp 379-388.
6 Khan, M. S. ; Chun, S. C. ; Raj, S. K. ; Tiwari, A. K. ; Gupta, P. ; Seth, P. K., First report of Cassava mosaic virus infecting chilli (Capsicum annuum) in India.. 2011, Journal of Plant Pathology, 93, 4, Supplement, pp S4.67.
7 Kushawaha, A. K. ; Rabindran, R. ; Dasgupta, I., Phylogenetic analysis and biolistic infectivity of a cloned Sri Lankan cassava mosaic virus DNA-A from Tamil Nadu, India on Nicotiana benthamiana.. 2015, Acta Virologica, 59, 1, pp 57-63.
8 Narayana, D. S. A. ; Rangaswamy, K. T. ; Shankarappa, K. S. ; Maruthi, M. N. ; Reddy, C. N. L. ; Rekha, A. R. ; Murthy, K. V. K., Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease.. 2010, International Journal of Virology, 6, 2, pp 82-92.
9 Narayana, D. S. A. ; Rangaswamy, K. T. ; Shankarappa, K. S. ; Maruthi, M. N. ; Reddy, C. N. L. ; Rekha, A. R. ; Murthy, K. V. K., Distinct begomoviruses closely related to cassava mosaic viruses cause Indian Jatropha mosaic disease.. 2007, International Journal of Virology, 3, 1, pp 01-Nov.
10 Patil, B. L. ; Fauquet, C. M., Studies on differential behavior of cassava mosaic geminivirus DNA components, symptom recovery patterns, and their siRNA profiles.. 2015, Virus Genes, 50, 3, pp 474-486.
11 Patil, B. L. ; Rajasubramaniam, S. ; Bagchi, C. ; Dasgupta, I., Both Indian cassava mosaic virus and Sri Lankan cassava mosaic virus are found in India and exhibit high variability as assessed by PCR-RFLP.. 2005, Archives of Virology, 150, 2, pp 389-397.
12 Raj, S. K. ; Snehi, S. K. ; Kumar, S. ; Khan, M. S. ; Pathre, U., First molecular identification of a begomovirus in India that is closely related to Cassava mosaic virus and causes mosaic and stunting of Jatropha curcas L.. 2008, Australasian Plant Disease Notes, 3, 1, pp 69-72.
13 Rothenstein, D. ; Briddon, R. W. ; Haible, D. ; Stanley, J. ; Frischmuth, T. ; Jeske, H., Biolistic infection of cassava using cloned components of Indian cassava mosaic virus.. 2005, Archives of Virology, 150, 8, pp 1669-1675.
14 Rothenstein, D. ; Haible, D. ; Dasgupta, I. ; Dutt, N. ; Patil, B. L. ; Jeske, H., Biodiversity and recombination of cassava-infecting begomoviruses from southern India.. 2006, Archives of Virology, 151, 1, pp 55-69.
15 Semmalaiappan Manivasagam ; Nataraj Rajinimala ; Ramalingam Rabindran, Screening of virus specific primers against the Cassava mosaic virus.. 2009, Archives of Phytopathology and Plant Protection, 42, 9, pp 812-818.
16 Snehi, S. K. ; Ashish Srivastava ; Raj, S. K., Biological characterization and complete genome sequence of a possible strain of Indian cassava mosaic virus from Jatropha curcas in India.. 2012, Journal of Phytopathology, 160, 10, pp 547-553.

Sequences

Complete Sequence
 NC_003862.1 Sri Lankan cassava mosaic virus-[Colombo] DNA-B, complete genome, isolate SLCMV-Col.
 NC_003861.1 Sri Lankan cassava mosaic virus-[Colombo] DNA-A, complete genome, isolate SLCMV-Col.
 KP455487.1 Sri Lankan cassava mosaic virus isolate TVM3 segment DNA B, complete sequence.
 KP455486.1 Sri Lankan cassava mosaic virus isolate TVM3 segment DNA A, complete sequence.
 KP455485.1 Sri Lankan cassava mosaic virus isolate Attur 2 segment DNA B, complete sequence.
 KP455484.1 Sri Lankan cassava mosaic virus isolate Attur 2 segment DNA A, complete sequence.
 KR611580.1 Sri Lankan cassava mosaic virus isolate TVM1 segment DNA-B, complete sequence.
 KR611579.1 Sri Lankan cassava mosaic virus isolate TVM1 segment DNA-A, complete sequence.
 KR611578.1 Sri Lankan cassava mosaic virus isolate Malappuram segment DNA-B, complete sequence.
 KR611577.1 Sri Lankan cassava mosaic virus isolate Malappuram segment DNA-A, complete sequence.
 AJ314738.1 Sri Lankan cassava mosaic virus-[Colombo] DNA-B, complete genome, isolate SLCMV-Col.
 AJ314737.1 Sri Lankan cassava mosaic virus-[Colombo] DNA-A, complete genome, isolate SLCMV-Col.
 KF898350.1 Sri Lankan cassava mosaic virus isolate Erode segment DNA-B, complete sequence.
 KF898349.1 Sri Lankan cassava mosaic virus isolate Erode segment DNA-A, complete sequence.
 KC424490.1 Sri Lankan cassava mosaic virus-India[Attur:2009] segment DNA-A, complete sequence.
Partial Sequence
 KX343908.1 Sri Lankan cassava mosaic virus isolate Chaya-Bpl coat protein (AV1) gene, complete cds.
 DQ658180.1 Sri Lankan cassava mosaic virus isolate Sathiyamangalam AC1 and AC4 genes, partial cds.
 DQ645497.1 Sri Lankan cassava mosaic virus isolate Dharmapuri AC2 protein gene, partial cds.
 DQ645496.1 Sri Lankan cassava mosaic virus isolate Erode AC3 protein gene, partial cds.
 DQ641034.1 Sri Lankan cassava mosaic virus isolate Nagarkovil AC3 gene, partial cds.
 DQ641030.1 Sri Lankan cassava mosaic virus isolate Coimbatore AC3 gene, partial cds.
 DQ641029.1 Sri Lankan cassava mosaic virus isolate Salem AC3 gene, partial cds.
 AJ579308.1 Sri Lankan cassava mosaic virus - [Ker20] segment B, isolate Adivaram.
 AJ579307.1 Sri Lankan cassava mosaic virus - [Ker20] segment A, isolate Adivaram.
 JN595785.1 Sri Lankan cassava mosaic virus isolate Yethapur replication-associated protein gene, complete cds.
 HQ415788.1 Sri Lankan cassava mosaic virus isolate Namakkal/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415787.1 Sri Lankan cassava mosaic virus isolate Avinashi/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415786.1 Sri Lankan cassava mosaic virus isolate Bhavani/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415785.1 Sri Lankan cassava mosaic virus isolate Udayampalayam/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415784.1 Sri Lankan cassava mosaic virus isolate Satyamangalam replication-associated protein gene, partial cds.
 HQ415783.1 Sri Lankan cassava mosaic virus isolate Kerala replication-associated protein-like gene, partial sequence.
 HQ415782.1 Sri Lankan cassava mosaic virus isolate Sangagiri/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415781.1 Sri Lankan cassava mosaic virus isolate Thandamuthur/SLCMV replication-associated protein-like gene, partial sequence.
 HQ415780.1 Sri Lankan cassava mosaic virus isolate Ondiputhur/SLCMV replication-associated protein gene, partial cds.
 HQ415779.1 Sri Lankan cassava mosaic virus isolate Athur/MVD replication-associated protein gene, partial cds.
 HQ415778.1 Sri Lankan cassava mosaic virus isolate Athur/unknown replication-associated protein-like gene, partial sequence.
 HQ415777.1 Sri Lankan cassava mosaic virus isolate Athur/Kumkumarose replication-associated protein gene, partial cds.
 HQ415776.1 Sri Lankan cassava mosaic virus isolate Athur/h226 replication-associated protein-like gene, partial sequence.
 HQ113111.1 Sri Lankan cassava mosaic virus-Chilli pepper coat protein gene, complete cds.
 FN691429.1 Sri Lankan cassava mosaic virus partial AV1 gene for coat protein, isolate West Bengal.
 DQ490080.1 Sri Lankan cassava mosaic virus isolate Nammakal AC2 gene, partial cds.
 AJ890229.1 Sri Lankan cassava mosaic virus ac1 gene, ac2 gene, ac3 gene, ac4 gene, av1 gene and av2 gene, isolate Tamil Nadu 7, complete virus segment.
 AJ890228.1 Sri Lankan cassava mosaic virus ac1 gene, ac2 gene, ac3 gene, ac4 gene and av1 gene, isolate Tamil Nadu 6, complete virus segment.
 AJ890227.1 Sri Lankan cassava mosaic virus ac1 gene, ac2 gene, ac3 gene, ac4 gene, av1 gene and av2 gene, isolate Tamil Nadu 2, complete virus segment.
 AJ890226.1 Sri Lankan cassava mosaic virus - India [India:Kerala C4] ac1 gene, ac2 gene, ac3 gene, ac4 gene, av1 gene and av2 gene, isolate Kerala C4, complete virus segment.
 AJ890225.1 Sri Lankan cassava mosaic virus ac1 gene, ac2 gene, ac3 gene, ac4 gene, av1 gene and av2 gene, isolate Kerala 17, complete virus segment.
 AJ890224.1 Sri Lankan cassava mosaic virus ac1 gene, ac2 gene, ac3 gene, ac4 gene, av1 gene and av2 gene, isolate Kerala 15, complete virus segment.
 AJ607394.1 Sri Lankan cassava mosaic virus segment A, isolate Salem.
 EU022378.1 Sri Lankan cassava mosaic virus isolate Tamil nadu replicase (AC1) gene, partial cds.
 EF441869.1 Sri Lankan cassava mosaic virus isolate Salem nonfunctional coat protein gene, partial sequence.
 AM238433.1 Sri Lankan cassava mosaic virus recombinant defective DNA A, clone D8A2 (SLCMV-[Col]A).
 AM238432.1 Sri Lankan cassava mosaic virus recombinant defective DNA A, clone D8A1 (SLCMV-[Col]A).
 AM238431.1 Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D15B (SLCMV-[Ker4]B).
 AM238430.1 Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D5B (SLCMV-[Ker4]B).
 EF059982.1 Sri Lankan cassava mosaic virus isolate Nammakkal nonfunctional AC4 gene, partial sequence.
 DQ467899.1 Sri Lankan cassava mosaic virus isolate Coimbatore AC1 gene, partial sequence.
 DQ467898.1 Sri Lankan cassava mosaic virus isolate Erode AC2 gene, partial sequence.
 DQ467897.1 Sri Lankan cassava mosaic virus isolate Sathiyamangalam AC2 gene, partial sequence.
 DQ467896.1 Sri Lankan cassava mosaic virus isolate Nagarkovil AC2 gene, partial sequence.
 DQ467895.1 Sri Lankan cassava mosaic virus isolate Kanyakumari AC2 gene, partial sequence.
 DQ467894.1 Sri Lankan cassava mosaic virus isolate Gopichettipalayam AC2 gene, partial sequence.
 DQ467893.1 Sri Lankan cassava mosaic virus isolate Alwarkuruchi AC2 gene, partial sequence.
 DQ302764.1 Sri Lankan cassava mosaic virus segment A, partial sequence.
 DQ645505.1 Sri Lankan cassava mosaic virus isolate Salem nonfunctional AC1 protein gene, partial sequence.
 DQ645504.1 Sri Lankan cassava mosaic virus isolate Dharmapuri nonfunctional AC1 protein gene, partial sequence.
 DQ645503.1 Sri Lankan cassava mosaic virus isolate Erode nonfunctional AC1 protein gene, partial sequence.
 DQ645502.1 Sri Lankan cassava mosaic virus isolate Sathiyamangalam nonfunctional AC1 protein gene, partial sequence.
 DQ645501.1 Sri Lankan cassava mosaic virus isolate Nagarkovil nonfunctional AC1 protein gene, partial sequence.
 DQ645500.1 Sri Lankan cassava mosaic virus isolate Kanyakumari nonfunctional AC1 protein gene, partial sequence.
 DQ645499.1 Sri Lankan cassava mosaic virus isolate Gopichettypalayam nonfunctional AC1 protein gene, partial sequence.
 DQ645498.1 Sri Lankan cassava mosaic virus isolate Alwarkuruchi nonfunctional AC1 protein gene, partial sequence.
 DQ645495.1 Sri Lankan cassava mosaic virus isolate Dharmapuri nonfunctional AC3 protein gene, partial sequence.
 DQ645494.1 Sri Lankan cassava mosaic virus isolate Salem nonfunctional AC2 protein gene, partial sequence.
 DQ641033.1 Sri Lankan cassava mosaic virus isolate Kanyakumari nonfunctional AC3 gene, partial sequence.
 DQ641032.1 Sri Lankan cassava mosaic virus isolate Nammakkal nonfunctional AC3 gene, partial sequence.
 DQ641031.1 Sri Lankan cassava mosaic virus isolate Gopichettypalayam nonfunctional AC3 gene, partial sequence.
 DQ641028.1 Sri Lankan cassava mosaic virus isolate Sathiyamangalam nonfunctional AC3 gene, partial sequence.
 DQ641027.1 Sri Lankan cassava mosaic virus isolate Alwarkuruchi nonfunctional AC3 gene, partial sequence.
 DQ490088.1 Sri Lankan cassava mosaic virus isolate Salem nonfunctional AC4 gene, partial sequence.
 DQ490087.1 Sri Lankan cassava mosaic virus isolate Erode AC4 gene, partial cds.
 DQ490086.1 Sri Lankan cassava mosaic virus isolate Nagarkovil nonfunctional AC4 gene, partial sequence.
 DQ490085.1 Sri Lankan cassava mosaic virus isolate Kanyakumari AC4 gene, partial cds.
 DQ490084.1 Sri Lankan cassava mosaic virus isolate Gopichettypalayam AC4 gene, partial cds.
 DQ490083.1 Sri Lankan cassava mosaic virus isolate Dharmapuri AC4 gene, partial cds.
 DQ490082.1 Sri Lankan cassava mosaic virus isolate Coimbatore AC4 gene, partial cds.
 DQ490081.1 Sri Lankan cassava mosaic virus isolate Alwarkuruchi nonfunctional AC4 gene, partial sequence.
 DQ490079.1 Sri Lankan cassava mosaic virus isolate Coimbatore AC2 gene, partial cds.
 DQ490078.1 Sri Lankan cassava mosaic virus isolate Nammakal nonfunctional AC1 gene, partial sequence.