Sugarcane bacilliform IM virus

Family   : Caulimoviridae
Genus : Badnavirus
Acronym : SCBIMV

Introduction

Sugarcane bacilliform badnavirus infects sugarcane probably where ever it is grown. The infected palnt may appear symptomless or cause chlorosis, mottling and leaf freckle symptoms. It is often found mixed infection with other viruses of sugarcane. Of the two distinct species, SCBIMV is one of the species infecting sugarcane.

Major Diseases

Chlorosis and leaf freckle

Geographical Distribution

All sugarcane growing regions of the country.

Particle Morphology

Non enveloped bacilliform particles of 108-118 x 20-21 nm.

Transmission Method

Transmitted by mealybug, Sacharicoccus sachhari in a semi persistent manner.

Detection

ELISA and PCR.

Host Range and Symptomatology

Saccharum officinarum (Sugarcane) Leaf freckles, chlorosis and mottling.

References

1 Karuppaiah, R. ; Viswanathan, R. ; Kumar, V. G., Genetic diversity of Sugarcane bacilliform virus isolates infecting Saccharum spp. in India.. 2013, Virus Genes, 46, 3, pp 505-516.
2 Manoranjitham, S. K. ; Kavino, M. ; Thiribhuvanamala, G. ; Ganapathy, T. ; Rabindran, R. ; Kumar, N., Detection of banana [AB1] streak virus (BSV) Tamil Nadu isolate (India) and its serological relationship with other badna viruses.. 2012, African Journal of Biotechnology, 11, 81, pp 14632-14637.
3 Rao, G. P. ; Sharma, S. K. ; Deepti Singh ; Meenakshi Arya ; Priyanka Singh ; Baranwal, V. K., Genetically diverse variants of Sugarcane bacilliform virus infecting sugarcane in India and evidence of a novel recombinant Badnavirus variant.. 2014, Journal of Phytopathology, 162, 11-Dec, pp 779-787.
4 Viswanathan, R. ; Alexander, K. C. ; Anupam Varma, Occurrence of sugarcane bacilliform virus in sugarcane germplasm collection.. 1998, Indian Phytopathology, 51, 1, pp 91.
5 Viswanathan, R. ; Alexander, K. C. ; Garg, I. D., Detection of sugarcane bacilliform virus in sugarcane germplasm.. 1996, Acta Virologica, 40, 1, pp 05-Aug.
6 Viswanathan, R. ; Balamuralikrishnan, M. ; Premachandran, M. N. ; Tripathi, B. K., Sugarcane bacilliform virus: symptoms, detection and distribution in the world germplasm collection at Cannanore, India.. 1999, 1, pp 347-354.
7 Viswanathan, R. ; Balamuralikrishnan, M. ; Premachandran, M. N. ; Tripathi, B. K., Sugarcane bacilliform virus: symptoms, detection and distribution in world germplasm collection at Cannanore.. 1998, Proceedings of the 60th annual convention of the sugar technologists' association of India, Shimla, India, 19-21 September 1998., 1, pp A17-A24.
8 Viswanathan, R. ; Premachandran, M. N., Occurrence and distribution of sugarcane bacilliform virus in the sugarcane germplasm collection in India.. 1998, Sugar Cane, 6, pp Sep-18.

Sequences

Complete Sequence
 JN377552.1 Sugarcane bacilliform virus isolate CB86032 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377551.1 Sugarcane bacilliform virus isolate CBB49-166 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377550.1 Sugarcane bacilliform virus isolate CBD4/4 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377549.1 Sugarcane bacilliform virus isolate CB740 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377548.1 Sugarcane bacilliform virus isolate CB7805 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377547.1 Sugarcane bacilliform virus isolate CBSe02231 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377546.1 Sugarcane bacilliform virus isolate CBSnk03707 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377545.1 Sugarcane bacilliform virus isolate CBM9902 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377544.1 Sugarcane bacilliform virus isolate CB7204 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377543.1 Sugarcane bacilliform virus isolate CB6304 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377542.1 Sugarcane bacilliform virus isolate CBM9903 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377541.1 Sugarcane bacilliform virus isolate CBBO108 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377540.1 Sugarcane bacilliform virus isolate CB92020 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377539.1 Sugarcane bacilliform virus isolate CB86032-tc100 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377538.1 Sugarcane bacilliform virus isolate CB86032-tc104 hypothetical protein gene, partial cds; DNA binding protein gene, complete cds; and polyprotein gene, partial cds.
 JN377537.1 Sugarcane bacilliform virus isolate BRU, complete genome.
 JN377536.1 Sugarcane bacilliform virus isolate BT, complete genome.
 JN377535.1 Sugarcane bacilliform virus isolate BB, complete genome.
 JN377534.1 Sugarcane bacilliform virus isolate Iscam, complete genome.
 JN377533.1 Sugarcane bacilliform virus isolate BO91, complete genome.
Partial Sequence
 KC013277.1 Sugarcane bacilliform virus isolate CoSe6460 polyprotein gene, partial cds.
 KC013276.1 Sugarcane bacilliform virus isolate Co1424 polyprotein gene, partial cds.
 HQ324247.1 UNVERIFIED: Sugarcane bacilliform virus polyprotein-like gene, partial sequence.
 HQ324249.1 Sugarcane bacilliform virus isolate Kerela polyprotein gene, partial cds.
 HQ324248.1 Sugarcane bacilliform virus isolate Andhra Pradesh polyprotein gene, partial cds.
 HQ324246.1 Sugarcane bacilliform virus isolate Assam polyprotein gene, partial cds.
 HQ324245.1 Sugarcane bacilliform virus isolate Bihar polyprotein gene, partial cds.
 GQ385038.1 Sugarcane bacilliform virus isolate Thiruvalla polyprotein gene, partial cds.
 EF635929.1 Sugarcane bacilliform virus isolate CB91 clone 2 polyprotein gene, partial cds; and unknown genes.
 EF635928.1 Sugarcane bacilliform virus isolate CB91 clone 1 polyprotein gene, partial cds; and unknown genes.