LOCUS       HQ823570                 644 bp    DNA     linear   INV 19-JUL-2012
DEFINITION  Radopholus arabocoffeae isolate R2383 internal transcribed spacer
            1, partial sequence; 5.8S ribosomal RNA gene and internal
            transcribed spacer 2, complete sequence; and 28S ribosomal RNA
            gene, partial sequence.
ACCESSION   HQ823570
VERSION     HQ823570.1  GI:324435730
KEYWORDS    .
SOURCE      Radopholus arabocoffeae
  ORGANISM  Radopholus arabocoffeae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida;
            Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Morphological and molecular diversity of Radopholus on coffee in
            Vietnam and description of R. daklakensis sp. n. from Robusta
            coffee
  JOURNAL   Nematology 14 (1), 65-83 (2012)
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2010) Crop Protection, ILVO-Plant, Burg. Van
            Gansberghelaan 96, Merelbeke, O-VLDR 9820, Belgium
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Radopholus arabocoffeae"
                     /mol_type="genomic DNA"
                     /isolate="R2383"
                     /host="Coffea arabica cv. Catimor"
                     /db_xref="taxon:265050"
                     /country="Viet Nam"
                     /PCR_primers="fwd_name: TW81, fwd_seq:
                     gtttccgtaggtgaacctgc, rev_name: AB28, rev_seq:
                     atatgcttaagttcagcgggt"
     misc_RNA        <1..270
                     /product="internal transcribed spacer 1"
     rRNA            271..426
                     /product="5.8S ribosomal RNA"
     misc_RNA        427..611
                     /product="internal transcribed spacer 2"
     rRNA            612..>644
                     /product="28S ribosomal RNA"
ORIGIN      
        1 agtgacctat ccatacaatt ccgtcctttg gtgggcagtg cccctcaggc attggcgaaa
       61 cccatcaaat gtgacgcgaa cggctgggtt ggcgtctgtg agtcgtggag cagttgtagt
      121 ccatgtccgt ggctgcgatg atgcgactcg gtagggctgt catatgattt ttgacagctt
      181 aagacttgat gagcgcggac caagcgccgc caacaaccat ttttttccat taagcttttt
      241 caaatgccat gcaaggcaaa taaataattc tagccttatc ggtggatcac tcggctcgta
      301 ggtcgatgaa gaacgcagcc agctgcgata tctagtgtga actgcagaac ctttgaacac
      361 taaacattcg aatgcacatt gcgccattgg agtcacttcc tctggcacgc ctggttcagg
      421 gtcgtaaacc aaaaacgcag gacaaatgcg tacatgaatg cgtgataatt aatattttca
      481 tgcaatggaa attaaggttg tccaataatg tgcttggaca tgaatttcgt gagaattagc
      541 cgtgtggcga atgaaattca cgtatgttca tagtgcaaat tggcagcttt tccaaatcat
      601 tcgacctgaa ctcagacgtg aatacccgct gaacttaagc atat
//