LOCUS       HQ823568                 643 bp    DNA     linear   INV 19-JUL-2012
DEFINITION  Radopholus arabocoffeae isolate R187 internal transcribed spacer 1,
            partial sequence; 5.8S ribosomal RNA gene and internal transcribed
            spacer 2, complete sequence; and 28S ribosomal RNA gene, partial
            sequence.
ACCESSION   HQ823568
VERSION     HQ823568.1  GI:324435729
KEYWORDS    .
SOURCE      Radopholus arabocoffeae
  ORGANISM  Radopholus arabocoffeae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida;
            Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Morphological and molecular diversity of Radopholus on coffee in
            Vietnam and description of R. daklakensis sp. n. from Robusta
            coffee
  JOURNAL   Nematology 14 (1), 65-83 (2012)
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2010) Crop Protection, ILVO-Plant, Burg. Van
            Gansberghelaan 96, Merelbeke, O-VLDR 9820, Belgium
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Radopholus arabocoffeae"
                     /mol_type="genomic DNA"
                     /isolate="R187"
                     /host="Coffea canephora"
                     /db_xref="taxon:265050"
                     /country="Viet Nam"
                     /PCR_primers="fwd_name: TW81, fwd_seq:
                     gtttccgtaggtgaacctgc, rev_name: AB28, rev_seq:
                     atatgcttaagttcagcgggt"
     misc_RNA        <1..269
                     /product="internal transcribed spacer 1"
     rRNA            270..425
                     /product="5.8S ribosomal RNA"
     misc_RNA        426..610
                     /product="internal transcribed spacer 2"
     rRNA            611..>643
                     /product="28S ribosomal RNA"
ORIGIN      
        1 tgaacctatc catacaattc cgtcctttgg tgggcagtgc ccctcaggca ttggcgaaac
       61 ccatcaaatg tgacgcgaac ggctgggttg gcgtctgtga gtcgtggagc agttgtagtc
      121 catgtccgtg gctgcgatga tgcgactcgg tagggctgtc atatgatttt tgacagctta
      181 agacttgatg agcgcggacc aagcgccgcc aacaaccatt tttttccatt aagctttttc
      241 aaatgccatg caaggcaaat aaataattct agccttatcg gtggatcact cggctcgtag
      301 gtcgatgaag aacgcagcca gctgcgatat ctagtgtgaa ctgcagaacc tttgaacact
      361 aaacattcga atgcacattg cgccattgga gtcacttcct ctggcacgcc tggttcaggg
      421 tcgtaaacca aaaacgcagg acaaatgcgt acatgaatgc gtgataatta atattttcat
      481 gcaatggaaa ttaaggttgt ccaataatgt gcttggacat gaatttcgtg agaattagcc
      541 gtgtggcgaa tgaaattcac gtatgttcat agtgcaaatt ggcagctttt ccaaatcatt
      601 cgacctgaac tcagacgtga atacccgctg aacttaagca tat
//