LOCUS       HQ823566                 649 bp    DNA     linear   INV 19-JUL-2012
DEFINITION  Radopholus arabocoffeae isolate R103 internal transcribed spacer 1,
            partial sequence; 5.8S ribosomal RNA gene and internal transcribed
            spacer 2, complete sequence; and 28S ribosomal RNA gene, partial
            sequence.
ACCESSION   HQ823566
VERSION     HQ823566.1  GI:324435728
KEYWORDS    .
SOURCE      Radopholus arabocoffeae
  ORGANISM  Radopholus arabocoffeae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida;
            Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Morphological and molecular diversity of Radopholus on coffee in
            Vietnam and description of R. daklakensis sp. n. from Robusta
            coffee
  JOURNAL   Nematology 14 (1), 65-83 (2012)
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2010) Crop Protection, ILVO-Plant, Burg. Van
            Gansberghelaan 96, Merelbeke, O-VLDR 9820, Belgium
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Radopholus arabocoffeae"
                     /mol_type="genomic DNA"
                     /isolate="R103"
                     /host="Coffea arabica cv. Catimor"
                     /db_xref="taxon:265050"
                     /country="Viet Nam"
                     /PCR_primers="fwd_name: TW81, fwd_seq:
                     gtttccgtaggtgaacctgc, rev_name: AB28, rev_seq:
                     atatgcttaagttcagcgggt"
     misc_RNA        <1..274
                     /product="internal transcribed spacer 1"
     rRNA            275..430
                     /product="5.8S ribosomal RNA"
     misc_RNA        431..615
                     /product="internal transcribed spacer 2"
     rRNA            616..>649
                     /product="28S ribosomal RNA"
ORIGIN      
        1 ttcagtgaac tatccaatac aattccgtcc tttggtgggc agtgcccctc aggcattggc
       61 gaaacccatc aaatgtgacg cgaacggctg ggttggcgtc tgtgagtcgt ggagcagttg
      121 tagtccatgt ccgtggctgc gatgatgcga ctcggtaggg ctgtcatatg atttttgaca
      181 gcttaagact tgatgagcgc ggaccaagcg ccgccaacaa ccattttttt ccattaagct
      241 ttttcaaatg ccatgcaagg caaataaata attctagcct tatcggtgga tcactcggct
      301 cgtaggtcga tgaagaacgc agccagctgc gatatctagt gtgaactgca gaacctttga
      361 acactaaaca ttcgaatgca cattgcgcca ttggagtcac ttcctctggc acgcctggtt
      421 cagggtcgta aaccaaaaac gcaggacaaa tgcgtacatg aatgcgtgat aattaatatt
      481 ttcatgcaat ggaaattaag gttgtccaat aatgtgcttg gacatgaatt tcgtgagaat
      541 tagccgtgtg gcgaatgaaa ttcacgtatg ttcatagtgc aaattggcag cttttccaaa
      601 tcattcgacc tgaactcaga cgtgaatacc cgctgaactt aaagcatat
//