LOCUS       HQ823564                 652 bp    DNA     linear   INV 19-JUL-2012
DEFINITION  Radopholus arabocoffeae isolate R89 internal transcribed spacer 1,
            partial sequence; 5.8S ribosomal RNA gene and internal transcribed
            spacer 2, complete sequence; and 28S ribosomal RNA gene, partial
            sequence.
ACCESSION   HQ823564
VERSION     HQ823564.1  GI:324435727
KEYWORDS    .
SOURCE      Radopholus arabocoffeae
  ORGANISM  Radopholus arabocoffeae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida;
            Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Morphological and molecular diversity of Radopholus on coffee in
            Vietnam and description of R. daklakensis sp. n. from Robusta
            coffee
  JOURNAL   Nematology 14 (1), 65-83 (2012)
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Trinh,P.Q., Waeyenberge,L., Nguyen,C.N. and Moens,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2010) Crop Protection, ILVO-Plant, Burg. Van
            Gansberghelaan 96, Merelbeke, O-VLDR 9820, Belgium
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Radopholus arabocoffeae"
                     /mol_type="genomic DNA"
                     /isolate="R89"
                     /host="Coffea arabica cv. Catimor"
                     /db_xref="taxon:265050"
                     /country="Viet Nam"
                     /PCR_primers="fwd_name: TW81, fwd_seq:
                     gtttccgtaggtgaacctgc, rev_name: AB28, rev_seq:
                     atatgcttaagttcagcgggt"
     misc_RNA        <1..278
                     /product="internal transcribed spacer 1"
     rRNA            279..434
                     /product="5.8S ribosomal RNA"
     misc_RNA        435..619
                     /product="internal transcribed spacer 2"
     rRNA            620..>652
                     /product="28S ribosomal RNA"
ORIGIN      
        1 ctgctcttag tgaccatcca aaacaattcc gtcctttggt gggcagtgcc cctcaggcat
       61 tggcgaaacc catcaaatgt gacgcgaacg gctgggttgg cgtctgtgag tcgtggagca
      121 gttgtagtcc atgtccgtgg ctgcgatgat gcgactcggt agggctgtca tatgattttt
      181 gacagcttaa gacttgatga gcgcggacca agcgccgcca acaaccattt ttttccatta
      241 agctttttca aatgccatgc aaggcaaata aataattcta gccttatcgg tggatcactc
      301 ggctcgtagg tcgatgaaga acgcagccag ctgcgatatc tagtgtgaac tgcagaacct
      361 ttgaacacta aacattcgaa tgcacattgc gccattggag tcacttcctc tggcacgcct
      421 ggttcagggt cgtaaaccaa aaacgcagga caaatgcgta catgaatgcg tgataattaa
      481 tattttcatg caatggaaat taaggttgtc caataatgtg cttggacatg aatttcgtga
      541 gaattagccg tgtggcgaat gaaattcacg tatgttcata gtgcaaattg gcagcttttc
      601 caaatcattc gacctgaact cagacgtgaa tacccgctga acttaagcat at
//