LOCUS CO961471 595 bp mRNA linear EST 12-JAN-2011 DEFINITION pe22e07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YKAE_CAEEL P34264 PROBABLE RIBOSOMAL PROTEIN B0303.15 IN CHROMOSOME III. [1], mRNA sequence. ACCESSION CO961471 VERSION CO961471.1 GI:51334655 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 595) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 664 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..595 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gaggcaataa aggttgtgct tgatccgatc ctaaagacgc agattagggc acagatggcc 61 tctgccgctc cgcctctggg tccttcgctg gggcagcgtg gagtgaacgt ggcaaatttc 121 tgcaaagact tcaacagttc gactgcgcac atcaaacaag gcactatttt gcccgtgaca 181 gtgcatgtga agccggacag aagttacaat ctcgagatcg actcgccggc tacaacgtgg 241 ctgctgaaac aggcggcggg aattagacgg gacaaacagg aggcaggcga aatcgtcgga 301 cggctttctg tcaaacatat ttacgaaatt gcaaagatca agtccaaaga caagtctctc 361 gttggtgttc ccctgaggga tatctgccag atggtcatcc aaagggctca gacaattggc 421 atcgccgtcc aaaacgagga cttggatcca cagcggtata aggaattttt ggacacacga 481 agggaaattg tgaaacgaca attggaggag ataaccaaaa aggaacaagc aaaattgctt 541 agggcttaac tccttttccg caatcaattg ttgtggataa acctagaaat cttgc //