LOCUS CO961462 683 bp mRNA linear EST 12-JAN-2011 DEFINITION pe22d07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q20637 Q20637 F52A8.1 PROTEIN. [1], mRNA sequence. ACCESSION CO961462 VERSION CO961462.1 GI:51334646 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 683) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 711 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..683 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agttctgtat gattggcttg ctgttgtgcg ttgttgcttg tggagatgtg tgcggggaga 61 aaacactgtt ggatgagttg cgcgacttgg aaatctttca acttcgtagc ggcatatcgg 121 catgccccct gcctttggtg ggggaaccgt gccctcagtc caatgccatc ttctacttcc 181 gctgttgcgg acagctaaac gagagctgct gcttccgcct tcaagactgg ctcgtcgctt 241 tgatcgcact gtttttggtg cttatcatcc tcagttgctt cgtcaatctg atccgctgtc 301 tcttctgcag caactactga tgggatcgag ttacgcacaa tggaaaaggc catttcttgc 361 tcaccaattc gccgttatca aacttctttc aaccatttta cttattcaat taacttttct 421 ccaattatag ctaatgggaa caaagaatct taaacaaatc ccaatctatt cttcaagcaa 481 tcacatattt ttaaatattt tctgtgctct tcaatcatac cgataactct cgatcgcatc 541 atatttgtaa tgctataata tataactcac gaccaatcaa ctacgaatgc gtatgttgtt 601 tgttactttc actgacacat ttcttgactt gaaataaaac attcttcctg aaaaaaaaaa 661 aaaaaaaaaa aaaaaaaaaa aaa //