LOCUS CO961461 527 bp mRNA linear EST 12-JAN-2011 DEFINITION pe22d05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961461 VERSION CO961461.1 GI:51334645 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 527) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..527 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aaatcgtttg aaaagggagc cgattgagga tgaagacgga ttttcgtcca atacagcgat 61 acgcggatca acgataaaaa tggagccttc cgatataaat ccggacggcg atgaatcggc 121 aagtcattcg aaggctgcag tccaaagaca gccaaaacaa cacttcaaca acaaaaaggc 181 caaggggttg acgtatgccg ctgcgcgaag atatctcgag gaaaacaatt tggtcgtgga 241 ggtggccgag aacagacatc tcaccatggt cggtcgagga cctgtccgat gcagcataat 301 ttatcctcgg gacggtacct actcacttaa gggttggcac caactgggca gcgaggaacg 361 aattgcgagg agtgtcatcc agaagtcggt ggggcacttc agatccagca ttggcgcggt 421 cccgattgcc atcgggccgg tccacttcag cgaacaaatg cccattttgg gggccagcaa 481 ctgcatgcac ttggaagccc gcgtcaaaat gaatgcgttt agacttc //