LOCUS CO961459 419 bp mRNA linear EST 12-JAN-2011 DEFINITION pe22d03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RL2A_RAT P18445 60S RIBOSOMAL PROTEIN L27A, mRNA sequence. ACCESSION CO961459 VERSION CO961459.1 GI:51334643 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 419) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 1001 Seq primer: SL1 primer High quality sequence stop: 404. FEATURES Location/Qualifiers source 1..419 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cacgaaagct ccgcggacac gtctcgcatg gacacgggcg catcgggaag caccgcaagc 61 acccgggcgg tcgcggaaac gccggtggcc agcaccacca ccggatcaac ttcgacaagt 121 accacccagg gtacttcggg aaggtcggga tgcgcaactt ccacgtgcgc aagaaccact 181 actactgtcc gacgatcaac ctggacaagg tgtggtccct ggtcacggag cggacgcgcg 241 ccatgtacgc ggacgtgaag gacaatgcgc cggtgattga cgtagtgcgg gcgggctacc 301 acaaggtgct gggcaaggga ctgctgccca agcagccggt gatcgtcaag gccgagtact 361 tctcgcactc ggccgaagag aagatccaga aagcgggcgg cgcatgtgtg ctactctcc //