LOCUS CO961425 557 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21h12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O02268 O02268 F45H10.4 PROTEIN. [1], mRNA sequence. ACCESSION CO961425 VERSION CO961425.1 GI:51334609 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 557) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 554. FEATURES Location/Qualifiers source 1..557 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgtcctgatc tgtttgggtt ctgggtctcc agtggatggc gaaggagtgc tctggttcgt 61 tacgctgtgt tcgctagtcg tcagtacgac cgcaacagtg ctcttcatgg tgaacaagga 121 cggactcggt agagtcgctg ttgcaggagg attggtgcct tggaatgtta ttgagttcgt 181 gtactcctcg attctcacac ttctctgcgg cgttgctttt tggcttagtt tcggatatgc 241 tagccatgtt gagatcggcg gacactcagc tggatacgtg tttgccggaa tatttctgat 301 cgcacaaatg gtttgctatg caatccccac cttgctcatc tacaaccgac tgcgcggtga 361 gcaacacgag ctaatcgctg acatacaccc gttcggagtc agcaacgaca gcgccgccga 421 acaacgcgac cagtcagcac cgtagtcagt cgatcgattc aaaacaaagt taaattcatt 481 cttctcgaat acatatttta atcttcgatc acatttttct gagccaattt cattcatttc 541 gggaatgtat gttaaaa //