LOCUS CO961408 574 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21g05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q27511 Q27511 HISTONE H2A VARIANT. [1], mRNA sequence. ACCESSION CO961408 VERSION CO961408.1 GI:51334592 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 574) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 577 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..574 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tggcggcaag gcaagtcggg caaggacagc ggcaaggcga aatcgaagaa gatcatctcg 61 cgcagtgcac gtgccggtct gcaatttcca gtcggtcgaa tccatcgatt cctgaagaaa 121 cgcaccacca gcaacggccg agtgggcgca actgccgcgg tgtacagtgc ggctattctg 181 gaatacctca ccgcagaagt gctggagttg gccggcaacg cgtccaaaga cctgaaagtg 241 aagcgagtca ccccccggca cttgcacttg gccattcgcg gcgatgaaga actggactcg 301 ctgatcaagg cgaccattgc gggcggaggc gtgattccgc acatccatcg ctacttgatg 361 aacaagaagg gcgcccagca gcctggagca caaggaaagg gacagacagc ctgaggagcg 421 aacggaaaat gaagttacga agcgacacaa caaacaatca ctactattta atcaatttga 481 tgtctaacgt tccccgtact cacgccaagc attcacccca caattaatga gtaaacatgt 541 aacaatttga aaaaaaaaaa aaaaaaaaaa caaa //