LOCUS CO961403 487 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21f11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MER40 repetitive element, mRNA sequence. ACCESSION CO961403 VERSION CO961403.1 GI:51334587 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 487) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 495 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..487 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttggctcttc ctcatccttt gtctcgcatt tgctgttgag tgcaggagat ctgaagacca 61 aaaggagccc caccaccagg tgcgcgttca cttttccagg agggccaggt tcgcgccaat 121 gatgaagctg ttcggctcta ggaagtcctc ccagacaaac aaggtcccca aaaaacactg 181 ccgcaccaca gatcagtgtc ctggcggaac gcgctgcagg gcgggcattt gccagtgatg 241 aagggaaacg aatgggcgtg ggactggggg agaggagaca ccaaacaatg gccgccaaaa 301 gaacactatt ggaacacatt tgtttaggca ataccttgga gagagagaca ctttactcag 361 cccacagctt ttgcttttcg ataaacaatt gggtgtccca aaaaaaaaaa aaaaaaaaaa 421 aaaaaaaaaa aaaaaaagaa gagaaaaaaa aaccccccaa aaaaaaaaaa aaaaaaaaaa 481 aaaacca //