LOCUS CO961400 572 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21f08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961400 VERSION CO961400.1 GI:51334584 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 572) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 763 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..572 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agcggacttt ccgaaagccg attcaattgg gtgcattcct taacggtgtc agagctaatc 61 cggctccaaa tggtccaaca cgtcaaatcg aaacgattgt cgttgaatgc aaatcgtcac 121 gtcaaccacg aggaatggat tgtgtgatat tccggggtgg acatgcgaca cccgatcagg 181 aacttgaagc ctttatcaaa actaaagtgg gacaacacaa tgtgcttatg cgtcaggaac 241 gcgctgccgg taaaagaggc cgaccatctc tttccccgtt tcgtatgggc gacaaagcca 301 atgtcaatga gaagggcgga gaaaaatcag gaggactttc ctaccatcta atagcggatt 361 tggctgaaac acgcaatcca aatactccgg aagaacatat cgtgcgctac aacgctcatt 421 ttgagtacat tgctccgcct gaatcatcca agcgccaggg gattaaagag catggaagtg 481 acatgaaaga accaaaggga ggaggatttg cagtgggaga agctggtgga tctggataga 541 gccaggtatg aagcgggacc tgatacattc ca //