LOCUS CO961398 440 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21f06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:TCTP_CAEEL Q93573 TRANSLATIONALLY CONTROLLED TUMOR PROTEIN HOMOLOG, mRNA sequence. ACCESSION CO961398 VERSION CO961398.1 GI:51334582 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 440) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 693 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..440 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ccgccacgtt gtgagaaaag aaggagaact gtccctggac ggcgcaaatc catcaacaga 61 agaacaagat gagggaactg aagagcatgt ggaacgcgga attgatttcg ttctcaacca 121 ccggcttcaa gaaatgaact gctacgaaga ccaggctacg ttcaaagcat acatcaaaga 181 cttcatgaag aaagttatcg gacatctgga aaaggatggc aaacccgcca gtgatattga 241 tgccttcaag aagaagatcc aggcttgggt tgtttcgcta ctcaacaaag aacgattcaa 301 aaatctggca ttcttcatcg gggaaaatat ggccgatgga aagggtgagg gtcaggttgc 361 aattgtcgaa taccgtcaag tcgatggcga agaagtgccg accctgatgt tggtgaagga 421 agccttaacc atcgagaaat //