LOCUS CO961384 523 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21d08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961384 VERSION CO961384.1 GI:51334568 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 523) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 531 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..523 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttcccctcca ctcaagttca accaaacgcc aaacatgtct ccgttcctgt tcgcattcgc 61 ggcactgtgt ctgctgggca ctcgctcaac ggcacttctg agctcacccg gcgcagagcc 121 gaacaacctg cgcgcctatt acgcagcact gctagccagc gctgagccgc aggagggacc 181 caccgccgaa gaggcggcag cgcacaagaa gcgccgcgac ctggcaccgc cagccgccaa 241 aaaatacgac cgcaactgct tcttctcgcc ggtgcagtgc atgctctcgt tcaaggagaa 301 tgcagcacag cgtctggacg ccaacgacgc agtgctgctg aacactctgg cgggcagaag 361 atgagccaga cggccacaga tgatacgacg gcactttcac tttcacccac atccgccgat 421 ctgcgtcaaa ttcccactga tctcatatca actcttgcta aatttgggcg ttaaaaaaaa 481 aaaaaaaaaa aaaaaaaaaa aaattaaaaa aaaaaaaaac aaa //