LOCUS CO961381 448 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21d05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:NODL_RHIME P28266 NODULATION PROTEIN L, mRNA sequence. ACCESSION CO961381 VERSION CO961381.1 GI:51334565 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 448) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Trace considered overall poor quality Seq primer: SL1 primer Sequence considered overall poor quality. FEATURES Location/Qualifiers source 1..448 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 caagtctatg ctccagcgca tgctggacag cgaactgtgt cgcttcgagg accccgcatt 61 gcaggagcaa ctgaaaaaag cggaggaatg gctgtcccgc tacaacttgt cgctggccct 121 gcccagggaa caaagggcac agatcctgcg cgaacgcatc ggcagtttgg gcgccggaag 181 tgtgattcgt ccgccattct attgcgactt cggctacaac gtccacctgg gcgacggggt 241 gttcctgaac tacggctgca cgctgctgga cgtgtgccgc atcgacatcg gggagggcac 301 ccagatcggc cccaacgtcc agatctacgc ggcggaccat ccgcgcgacg cggaaacgcg 361 cgcccagggc tgggagtttg ggcgtccggt gcgcatcggc cgacacgtct ggatcggcgg 421 gaacgccgtc atagttcccg gggtcaca //