LOCUS CO961380 557 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21d01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YWY1_CAEEL Q11088 HYPOTHETICAL 19.2 KD PROTEIN C01C4.1 IN CHROMOSOME X PRECURSOR. [1], mRNA sequence. ACCESSION CO961380 VERSION CO961380.1 GI:51334564 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 557) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 567 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..557 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atcgcttctg tcctgctgat tttctctgtc gccgaacaac ttgatacgac caattccgca 61 gcaccaccac acacccctcg ccccctgatg agcatggacc gaaatgcatt tcgcatgagt 121 tttggaaaga agaggacagc tcagagtccc atgtcgcctt tggacagaaa tgtgttccga 181 atgagcttgg gaaaacgggc gcccgcaata aagccgagtt ggtacgatgc aataaagaaa 241 gagcaggagg acgacgctcg tcagagaaat ggccatcaac aaaacaacaa cagtccctcg 301 ctaaaaatga aaatggaccg aatcatggaa ccgcaatggc gacaaaagct gttcaacaag 361 agtctggacc gatggtactt cggaggaaag cgatgatggg gaacaatggc aaagtgaccg 421 gcgaccattc caaattccaa acacatgtag ataaatgtga gcccgcattt gccgtaatgg 481 cagaggcaga cataatagca gcatacaatt gaccggtcaa taaatattag tggattaaaa 541 aaaaaaaaaa aaacaaa //