LOCUS CO961377 506 bp mRNA linear EST 12-JAN-2011 DEFINITION pe21c08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961377 VERSION CO961377.1 GI:51334561 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 506) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 696 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..506 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 attgatgcag agctgatgac aaagattaga aatctgcctg cacgaaaaag gaaaggcggc 61 cccttaaaca atagcatcaa aacaatggct ctgggcaaaa ataacgccga tctggggcta 121 aaatccatat atgtttcgag gaggcccagc aataacacaa attattcttt acgagcagtg 181 cgtaggaaga taacagcttc tagtgaacat tgtaggagct gatgcacaac aaactttcat 241 ggaaatggag agtgaaaggc catcacccaa catgccgatg aacaatgccc gtgttgcaga 301 gtgtaatttg ccgaacaatg gaattgccaa aaagctagca aaatcatctg cagtgaaatt 361 gcccaaaact accgcttcta gacgggttcg atacggttgg ttcgctgaaa acaaatcgga 421 tgaattcaaa attaaaaatt ccactaactc gaatcataaa ttacgcgatc ctgatgaatg 481 ggtttgcttc aacgaacgca aagctt //