LOCUS CO961345 557 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20h01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RPB8_CAEEL Q19826 PROBABLE DNA-DIRECTED RNA POLYMERASES I, II, AND III 17.1 KD POLYPEPTIDE, mRNA sequence. ACCESSION CO961345 VERSION CO961345.1 GI:51334529 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 557) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 580 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..557 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgaacagcat ctatttctaa gacctgttta cggtgaagaa catagacccg gatggcaaga 61 agttcgaccg agtcagccga ctcttctgcg acagcaagtc cttcaagatg gatcccattc 121 tggacgtgaa cacgcaactc taccaaatgt gcatcaacga caagttccgt ctgatgctct 181 gcacatcggt ccgggaggac gaactcgcgg acgagggcga gtacgacaaa tcgatcgaga 241 acgtccctcg ggtgtggatg ttcgaatacg tgatgtacgg gaagatctac aagatcgagg 301 ccgacgacag cagcaatccc gagaccaatc ggatggcggc ctacgtctca tttggcggac 361 tgttgatgcg aatccagggc gaggccaaca acctgaacgg attcgaagcg gacaggaata 421 tttacttgct actgaagaaa gttccaaact aattatctca acactcgttc gtttgtttgt 481 tctcatcaga atattaaatc tgggaattat ttacttttat gtatcgttaa aatttaaaaa 541 aaaaaaaaaa aaacaaa //