LOCUS CO961339 793 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20g06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O45764 O45764 T06E6.10 PROTEIN. [1], mRNA sequence. ACCESSION CO961339 VERSION CO961339.1 GI:51334523 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 793) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 815 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..793 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctgatcctcg caacttttcc caccccgcaa ttcccccatt tcctccattc atcattcggc 61 tcgcttctcg acacctttca ccatccgccc acgaacgctt tgtttacaca tccaatggct 121 gcaatggatt gttttccaaa tattatagaa aacttttggc gccagattgg gatgacgaag 181 ggacagcggc ggcggacagc agcaggtgag ctgaggtgaa agaagcgtgg gcagaggacg 241 gatgggggct aaggacacca ctttttgggc aaatatccaa tccatatcca gagaggaagt 301 ggtggtgctg agaacacgag agcgggggca acgcgaaaga gagaggaagg agccagagcc 361 agagcaatcc cccatccatt tccattccat tccacacaaa tttttccatt ggcgccaaca 421 cgctggtgaa atgaaggagg gcgagaagag cgcagcgccc aagggaggga taatgcacga 481 caactcgcaa ttcaattggc tgacttcccg cgctcagaat gcgcccgtat tcgctgtgcc 541 gccggcgagg agtgccgact ggtgcgcgtc cagtgcatcc gtgccccctg tcccccgttg 601 cccatgtgcc gtcccatcgc gaatccgttt ccgcccgaac aaagaagagt ggtggccacc 661 gtccgctgga agcgccatcc ccaatgaatc catttgtgtt cggtgacgtt gtttccgctg 721 acaacggtga cgttgtttcc gctgacaacc cgtttccgta atcttacaca acaaatacta 781 cttaacatgc aaa //