LOCUS CO961336 629 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20g02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961336 VERSION CO961336.1 GI:51334520 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 629) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..629 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctgctgcaag gtcccctgaa agcagaaaag gcatcactga atgtcaacaa cgagccattt 61 tatttgaatt tcgacaattt tccggcggta tgaaagcgca aaatggaaaa aaaaaaaaaa 121 aaagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaccaaaac ccgaaaaatt tttcccccca 241 gggggaaatt tcggaaaatt ccctcaaaag ggggggcccc ccaacctggc tttaaagggc 301 cccattcccc ccaaaggggg ttctattaaa attcccgggc ccgcttttta aaacctccgg 361 gcggggaaaa ccccggggtt tccccatttt atccccttgg ccccaatccc ccttttcccc 421 gcgggggtaa aaacaaaaaa gccccccccc tttccccttc cccaaatttg ccccccccga 481 aggggaaaag gacccccccc ggaaccgccc cttaacccgg gggggggggg ggggttcccc 541 ccacggggcc cccaacattt gccgccccct aacccccccc ccttttcctt tttttccttt 601 cttttccccc aagtttcccg ggttttccc //