LOCUS CO961325 539 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20e10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:H2B_SIPNU P30757 HISTONE H2B. [1], mRNA sequence. ACCESSION CO961325 VERSION CO961325.1 GI:51334509 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 539) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 574 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..539 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gaaacactcg aaccaaaaat ggcgccacac aagccgtccg gcaagggagc gaaaaaagcc 61 gtgaagtcga ccaaggcggt gcgcaccggc gacaagaagc gccgaaagtc gcgcaaggag 121 tcctactcgg tgtacatcta ccgcgtgctg aagcaagtgc acccggacac tgggatctcc 181 tccaaggcga tgtcgatcat gaactcgttc gtcaatgacg tgttcgagcg catcgctgcg 241 gaggcgtcgc gtctggccca ctacaacaag cgctcgacca tctcgtcccg cgaaatccag 301 accgcggtgc gcctgatcct gccgggtgag ctggccaaac acgctgtctc ggagggaacc 361 naggcggtta ccaagtacac ctcgtccaag tgaggggtcg gcaggtgaaa gtgggccaca 421 gcagcagaaa gggacaacgt tttcatttta aattatgtaa aaaagagagc aattttgact 481 acagttggtt atataaaatg taaaataaac tgattcagtc gaaaaaaaaa aaaaacaaa //