LOCUS CO961323 633 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20e08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961323 VERSION CO961323.1 GI:51334507 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 633) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 638 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..633 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tacggcattt atcgctcggc atcggtgagt cgggtgccgg aaaagagcga tgccccggtt 61 aaggcggcgg aaagaggcgt ctcgttgccc cgctccccct ccgtgtcgca catccccgca 121 ttcggcgttg ccggcgccac ctacatgccg ttcaccggct tctccgcagt caggaccagc 181 gtctatcgca ccaacccatt cttctcgctg agaagctaca tgcaggacaa gtactactac 241 ttctcgcacc gctacaagcg cacccaattc caccgacact actaccacgg tcaagtcgag 301 aactacccgt acagatggaa cttcgtcccc aagggcaccg ccaccggcca gttctattat 361 gccagacgag tccaattcga tcccgtccag tatgggctgc tgcgctatta tgacccctac 421 cgtcgctact acgatccgta ccgcgactcg tacatcgaat tgtacaacta cagacccaaa 481 ctgatggaca gcctctattg aagtgcccag aaccgaatgt tagaaagatg gatggaatgg 541 atttgaacgc gataaacaga agccattgtg gatgggaact cctctgtttg tttgttcagc 601 gaaccctcga ttgagcaaaa aaaaaaaaaa aaa //