LOCUS CO961304 621 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20c06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS21_CAEEL P49197 PROBABLE 40S RIBOSOMAL PROTEIN S21. [1], mRNA sequence. ACCESSION CO961304 VERSION CO961304.1 GI:51334488 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 621) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..621 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 acgacgcagg cgaaacttgt ggagctgtat gttcctcgca aatgctcttc atcttcgcga 61 atcatcgccg ctaaagacca cgcctcgatc cagctggaca ttgttggcgt aaacccggaa 121 accggtcgta tggacccgag caaaacgacc aaatatgcga tctgtggaaa gctccgtttc 181 atgggcgagt ccgacgattg catcctgcgt ttggcacaga aagatggaat tgttccagaa 241 aagatgtaat cgtctgcgcg atccaaaatt gcgatttgtt gactgtttct gataaatgtt 301 gtcgctataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaagg aaaaaaaaaa aaaaaaaaaa 421 acccccggcc cggaaactct tcccccccca ggggggaatt tgttaaaatt cccccaactg 481 gggggcccct taaaatgtct ttaggggggc ccatttcccc caaaaagaga cctaaaaaaa 541 cttccggggc ccccttttta acccctccgg gggggaaaaa ccggggggta acccaaataa 601 ccccccccgc cccccccccc c //