LOCUS CO961292 407 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20b02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains TAR1.t1 TAR1 repetitive element, mRNA sequence. ACCESSION CO961292 VERSION CO961292.1 GI:51334476 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 407) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 425 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..407 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggtgtccca cgtgatcgtt tgtgcaggca actacagcgc caacacctac gtgcacggag 61 tcctgacgcc cgaacaaatg gccgctgttg ccgccaacgc gatggatcac cagccgaacg 121 gtttccacac gcaactgccc gccttccaag tgctggacca gttctcgcaa atggggtatt 181 ctgtactcgg aatgtccgga aacggagcgt gccaaacaag ctgggtgctc ggcagacagc 241 agtgaacgat gaagaaacaa aggtggatat agtcggaccc agtggctgaa aatggaatga 301 tgaccaatca aatcagcgta aaataatagt tttagacttt gtttttcgga aagagaagtg 361 aaaattgcaa taaagaacaa acagtcaaaa aaaaaaaaaa aaacaaa //