LOCUS CO961287 450 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20a09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961287 VERSION CO961287.1 GI:51334471 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 450) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 454 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..450 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gccttcttcg ccttggtgtg tgtgcttctc gttgtggtgg tggccgccgt tcatgccggc 61 gacgaggaaa tgggaatgcg cgcagttcgt cgacgtcgaa atgtggacca cccttccggg 121 gttgtggccc aaatgcgcat gaatgtggac ggctctgccc ctctgatgga cgtgagcgcc 181 gcccaactgc gagcgcgtcg cgacctgtgc agccaggcct gcgtttgcac tcgtcgccgt 241 cgcgatgcgc cttttggctt cggcgatgcc gttgtgcgca agcgtcgcga ggacgcgtgt 301 gaatcggaat gcgtgtgcac cggcaaataa agaatggaga aatgggacac acaaaatttg 361 tgaaaaatcc aaattgtatc aaaaattcaa atatttctac gcataaatta gaaatgaaaa 421 aaaaaaaaaa aaaaaaaaaa aaaaaacaaa //