LOCUS CO961284 641 bp mRNA linear EST 12-JAN-2011 DEFINITION pe20a06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains LTR7.t1 MSR1 repetitive element, mRNA sequence. ACCESSION CO961284 VERSION CO961284.1 GI:51334468 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 641) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..641 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 taatgtaatt ttgatggaat cgtaaagcga caccagctac atatttgtgt aaagtaaatt 61 ctgcagccga tagatacttt gcgattttcc tgcgtctgtt caaattcaaa tattcaaata 121 cggaaatata aattacggtt tgctttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 241 aaaaaaccca acccccaaac atttttcccc ccaaggggaa aatttccaaa aatccccccc 301 acggggggcc cccccaaaca accctaaaag ggccccattt cccccaaaag ggaccccttt 361 aaaatttccc ggcccccctt tttaaacccc ctggcgggga aaaccccggg gtttccccat 421 tttaaccccc ttgccccccc cccccctttc ccccccgggg aaaaaaaaaa aaaacccccc 481 ccctttcccc ccccccaaat tttccccccc cgaaagggga aagggccccc cccttaaccc 541 cccctttaac cccggggggg gggggggttc cccccccggg gaccccccac tttgcccccc 601 ccctaccccc cccctttttt tttttttccc ctttttttcc c //