LOCUS CO961278 555 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19h11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9VP65 Q9VP65 CG12975 PROTEIN, mRNA sequence. ACCESSION CO961278 VERSION CO961278.1 GI:51334462 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 555) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 563 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..555 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcaatgaagc tgttgatgcc aatttcttct catcccactt cctaaagggt gtgaataccg 61 gttatccgct gatattgcgt gcaaccaaaa ttgagagagt ggacgccaac ttcaacgcag 121 agttcgttaa gaagatgatg ccacgcctgg actaccaggc tcttttgcaa gctgccaagg 181 tggtggacca gagcgcagtg gcggaactgc ccgaagagct aaacgtcgag tgggagaaag 241 acgaggagct gctaaaaaag atacattcgc tgttgatgag ctacgagatt gtggagggcg 301 agctggagtg ccccgaaaca catcacgtgt tcaacatccg agagggcatt cccaatttcc 361 tggtcggcgc tgacgaggtc gcctaggatt cggaccttgg aatcaaggtc tgaaggcaaa 421 ttccatgttt ctgttcccaa taatccatct ctgcaatttt ttgagtttat atttgagtcc 481 gcattaaaca catattcaga ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa ccaaa //