LOCUS CO961274 544 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19h06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS23_CAEEL Q19877 PROBABLE 40S RIBOSOMAL PROTEIN S23. [1], mRNA sequence. ACCESSION CO961274 VERSION CO961274.1 GI:51334458 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 544) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 595 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..544 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgcgtaagct gaagaatcac cgtcaggaac agcgctggaa tgacaagcgc tacaagaaaa 61 ccaactcggg aactcgctgg aaggccgatc catttggagg agcttgcatg gccaagggca 121 ttgtgctcga gaaaatcgga gttcaagcca agcaaccgaa ctcggctatc cgtaagtgta 181 gtccgtgttc agttgatcaa gaacagcaag aagatcacag ccttcgttcc aaatgacgga 241 cgtttgaact tcattgagga gaacgacgag gtccttgttt ccggcttcgg ccgaagtgga 301 cacgccgtcg gagatattcc tggagtgcgt ttcaaggtgg tcaaagttgc caacacatct 361 cttctggcgt tgttccgcgg aaagaaagag cgaccacgtt cataaagccg cacaagttgc 421 agaaacagat cacggacgga tttgttatca ctgttgatgt ttaagtaaat tggaaaaatc 481 aaaaagaaaa aaacaaaaaa agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaac 541 caaa //