LOCUS CO961269 549 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19g11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MER22 repetitive element, mRNA sequence. ACCESSION CO961269 VERSION CO961269.1 GI:51334453 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 549) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 551 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..549 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atccaaaatc cattcacgct gtcctttccg cgacaatcga ccactaaaat ggcccagttc 61 ctgtacgcat ttctcgcctc cctactccta ggtgtggtgc tcttcgaccg aaatgcgatg 121 ggacaacagt tcgcagagtt cggggttgcc ggccctgaaa tgatggacct ggactacggt 181 agcatcaatg acattgagag ccttgtgaag agagcctcgt tggaccgatc ggcgatggcc 241 agattcggca agcgcgcacc gttggaccgg tcggccatgg ccagattcgg caaacgcgcg 301 ccactggacc gatccgcgat ggtcagattc ggaaagcgag cccctctcga ccgatcggca 361 atggccagat tcggaaagtg aagtgacaga gcgagcggtg tggcgcattt tttataaata 421 agtgtgaagg aagcaagcac gatctaacat gttcacacaa acacactttt ggatcaacag 481 ttacgaataa acaacccttt ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaccaaa //