LOCUS CO961254 530 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19f07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961254 VERSION CO961254.1 GI:51334438 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 530) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 547 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..530 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 acgatagcga acttggacga gtcgagcggc gcccatctcg actcgcttgg cgaatggcgt 61 tcatcgcatg gaacagcacc cccgaggagg tggatgcgcc cgccgaagcg gaggaaccga 121 acaacagtgg aacaatgcaa actgggagca gcgctgagga agaagtgaag agcgccattc 181 ggccaacaga cggaacaaca acaacagagc aagaaggaaa cggacgaaca acaaaaacaa 241 agcacagccg cagagtcttt ctcgacgcat tcggcacccc cagcagagtc tttcacaagc 301 cattcatttt cggtctttca tccccgcaat ccaccatttg ttgcccgcac cccaaaagcc 361 caaaaacaga actacaaaca cacacaaaca caattgtcgc ggtcagcact gtgcccggag 421 gactgtgacc aaaacatgcc ctaaatgtgc gaatgaataa aacggattca ccacaaacag 481 cgaaaaatac catcttttaa aaaaaaaaaa aaaaaaaaaa aaaaaacaaa //