LOCUS CO961248 337 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19e11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains TAR1.t2 TAR1 repetitive element, mRNA sequence. ACCESSION CO961248 VERSION CO961248.1 GI:51334432 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 337) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 365 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..337 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggagccatt cgcagcagca catcggcgct cagcagcggg ggacgagagc gggtgccgag 61 ggccaaaacg ggacggaaac agcggctgtg gcggtggagt ggggcggcag aggcattgtg 121 cggaggtcgc tgcgcaaacg gaagatgtgt catcaggatc agaatggtgt caattcggcg 181 gcggaaggtg aggccggtga gtggcagcgc gacagcagca ccatttgacc aaatttcgcg 241 tcagctcttc ttcctgcctg cgaaataaac tgtgtgctaa tcaaaaaaaa aaaaaaaaaa 301 aaaaaaaaaa aacaaaaaaa aaaaaaaaaa aaacaaa //