LOCUS CO961238 524 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19d08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:P90860 P90860 F36A2.7 PROTEIN. [1], mRNA sequence. ACCESSION CO961238 VERSION CO961238.1 GI:51334422 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 524) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 713 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..524 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ccaatttcta aattgggctt caccactcca cccagcctct tcggggtgcc ttctccgtgt 61 tttcgcgatt cgaaaatttg ccagtggctg ttttggaacg gccgccaaag gctaagatcc 121 aactgaaacc accaccaggc gagaagggct acatgaacta tgaacgtgac ttttcacgcg 181 aatcacgtta tacaaagcca cataagaaga ccgacacatt tataagattt gtaacattta 241 acgctcgcca tcacatggag ctctggccga tcgtatttct ctgcggtgtc tcttgttgcc 301 tagtcgtggg catagcctac ataagttttg aaaaagtgga agtctggctt gacagaagca 361 ccaagacccc accatgggat tgggcgcgca ttcgtgacaa atactggaga atgcaaacag 421 tatttttcga tccacttggc gggacccacc agcgtataga aatcatggag aagctacagg 481 atgagatgtt ggaggcggcc aagcagcgtg gaaccgcgat gccg //