LOCUS CO961235 602 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19d05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01868 O01868 CODED FOR BY C. ELEGANS CDNA YK71B8.5. [1], mRNA sequence. ACCESSION CO961235 VERSION CO961235.1 GI:51334419 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 602) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 604 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..602 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gctaatttta cgcgtaaaat agcgataatg aaaactgaga cctgtgttta ctctggatac 61 aagatccacc ctggacatgg caagcgcata gtgcgggcag atggaaagat tcaaatctat 121 ctgagcgcta aatgccaacg cggtgctgca ctcaagcgca acccgcgtga tgtgccatgg 181 actgtgcttt accggcgcaa gcacaagaag ggtgtgcacg cggaagaagg ccaacagaag 241 aagcgcatga agcgcactgt ccaaatagtc tctcgaccca tcgccgattt gactgtggaa 301 gcgttgttgg cacagcgaaa ccagaagcct gagttccgca aacagcagcg tgatgcagcg 361 atcaaagcgg ccaaggaatc tgtacgcgca aagaaagagg aaaccaagaa gaaggccaaa 421 ctggacaaaa aggcggcacc ccaaaagatg aaggcggcta agcctgtgaa agccccaaag 481 gcacaagttg ggggcaaacg ttgaaaagag tttgattgtt gagtgttgat ccaatttgcc 541 gatcattgtt gttaagcaca aaaataaaac agtttaccat aaaaaaaaaa aaaaaaaaac 601 aa //