LOCUS CO961232 369 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19d01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MSR1 repetitive element, mRNA sequence. ACCESSION CO961232 VERSION CO961232.1 GI:51334416 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 369) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 527 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..369 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cagttctctt cggagaagac ggtgctagag cttgactacg ccgtcttgaa gagccactcg 61 cggatttggc cacacatctt ggctactgtg actgccgtcg tcatttgtca agcgggcatt 121 ggactcttgc tggccgcaac cggctggtcg attgtgactg gagagatgac aaagatgaag 181 ggagagttga agggcgacat gtccgagatg aagggcgaca tgtccaagat gaagggagag 241 ttgatcgaga agattgtgga gaagtagaaa taagatgcat attcgattga caccgctatt 301 tggacacata atttatacga caaaagataa atagttgaag aaaaaaaaaa aaaaaaaaaa 361 aaaaccaaa //