LOCUS CO961229 710 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19c10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O42697 O42697 RIBOSOMAL PROTEIN L37. [1] ;contains MER22.b1 MSR1 repetitive element, mRNA sequence. ACCESSION CO961229 VERSION CO961229.1 GI:51334413 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 710) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..710 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gccgccaaaa tgacgaaagg aacccaatcg tttggtatgc gtcacaacaa gacgcacact 61 ctgtgccgtc gttgtggccg ctcctcctac cacatccaga agcacacttg cgcgtcctgc 121 ggttacccag ccaagcggaa gcgcacttac caatggtcgg tgaagtcgat tcgccgtcgc 181 accacgggca ctggacggat gcgccacctg aagctggtgc agcgccgctt ccgcaacgga 241 ttccgcgagg gcactgtggc caaatcgcag aagaagggca agagcgccta gacgccggag 301 atttgaacca gaacattgtt ttgatcgatt gttgcgaaat tgttaattga gaaaacattg 361 aaagagactc ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ccaatccccc aaaaaggttt 481 ttcccccggg gggaatttcg gaaaaatccc ccccccgggg gggcccccga aggggccttt 541 aagggggcca atttccccca aaagggatcc gaataaaatt tcttgggcct tttttttaaa 601 aatccggggg gggaaaaccc cggggtttcc ccaattaaac ccccttgcac ccccccccct 661 tttccccacc gggagaaaaa caaaaaagcc cccccccatt ccccctcccc //