LOCUS CO961224 471 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19b12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO961224 VERSION CO961224.1 GI:51334408 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 471) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 672 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..471 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 caacgggatt caggcgggct ccgtcaagaa gatccagcag ccgactggca acttcgcctg 61 catggagaac atcaacgctt tcgtgtcgtt cgcgaagagc cagggagcgc ccaccgagga 121 gaccttccag agcgtggact tgttcgaggc acgtgacctc tactccgtgt gcatgaccct 181 gttgtcgttg ggccgaatta tggagaagaa gggaaagccg aacccattct ctggatgaag 241 agtagaagtg agtgcagcaa aagacggaca gagcatgtgc tatcgctccc attcgagaac 301 tccccgtttt gcgaattttc tccccgtgtg cgaccttgca acaataccga ggcgttaact 361 gttttcccct ctctctcctc tcaaactgtg ggcgtttgaa aatagcgatg ccggaataaa 421 tggccaattc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaacaa a //