LOCUS CO961219 695 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19b03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961219 VERSION CO961219.1 GI:51334403 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 695) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 749 Seq primer: SL1 primer High quality sequence stop: 677. FEATURES Location/Qualifiers source 1..695 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggtgaaatgg ccgcgaacat gaacgacgcc gacgctggtg acgctcaggt gcacttggaa 61 caggacggaa agcgagtttt cggcgaaccc gccattcatg cgatcatccc gagcgagttc 121 aaaaacatgg cttcagttgg acgttatagt gtagctgacg aagacggcgt tgttgtgaat 181 gtagctgtga aagttgacgg gaaaccgtac tgcttcggcc gaaaactgcc gatcatgatc 241 gacttcgacg ggtttgacga cgtgtcggtc ccgacgcgct attgctccaa aatgccgaac 301 cagcgacttc gctttgtcgt gctcctatgc aatggaggcg taattgacgc aaatgccgtg 361 gcaaaggatg cccgcgatga gttcgaggaa tggcgcactg tgtttgggtg tcagatttct 421 gagatgggaa atcagggatg cggaatgccg cttttgcaag tcaccattcc attcgagaac 481 tttatcggcg agaaatttta cgaacttctg gaggcgatgg atgcgatcat caacgcaaac 541 gatccgaaca aatctaacag ctctggtggt tctggcgtcg tcaatctgct ggcgccgatc 601 gagcagtgat ttcctgcgaa aaaagcagtt ttgttgttaa cgtatattgt tggcaaaata 661 taaatgtttt gttggtcnaa aaaaaaaaaa aaaaa //