LOCUS CO961211 618 bp mRNA linear EST 12-JAN-2011 DEFINITION pe19a05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO961211 VERSION CO961211.1 GI:51334395 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 618) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 627 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..618 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtctcgcact actgccggag gtattggttt ccaggttgtg gccaagcagg cgagcaaata 61 cagcaaccag gggggagaga tgtgcctggc ctggatcaag aaaatgagcg gcgagaatat 121 cagcaccaac ggcgaccgtg agaacttcta caaattgcta aaagacggca cactactgtg 181 caagctggcc aacgggattc aggcgggctc cgtcaagaag atccagcagc cgactggcaa 241 cttcgcctgc atggagaaca tcaacgcttt cgtgtcgttc gcgaagagcc agggagtgcc 301 caccgaggag accttccaga gcgtggactt gttcgaggca cgtgacctct actccgtgtg 361 catgaccctg ttgtcgttgg gccgaattat ggagaagaag ggaaagccga acccattctc 421 tggatgaaga gtagaagtga gtgcagcaaa agacggacag agcatgtgct atcgctccca 481 ttcgagaact ccccgttttg cgaattttct ccccgtgtgc gaccttgcaa caataccgag 541 gcgttaactg ttttcccctc tctctcctct caaactgtgg gcatttgaaa atagcgatgc 601 cggaaaaaaa aaaacaaa //