LOCUS CO961204 489 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18h04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO961204 VERSION CO961204.1 GI:51334388 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 489) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 659 Seq primer: SL1 primer High quality sequence stop: 464. FEATURES Location/Qualifiers source 1..489 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggcgaccgt gagaacttct acaaattgct aaaagacggc acactactgt gcaagctggc 61 caacgggatt caggcgggct ccgtcaagaa gatccagcag ccgactggca acttcgcctg 121 catggagaac atcaacgctt tcgtgtcgtt cgcgaagagc cagggagtgc ccaccgagga 181 gaccttccag agcgtggact tgttcgaggc acgtgacctc tactccgtgt gcatgaccct 241 gttgtcgttg ggccgaatta tggagaagaa gggaaagccg aacccattct ctggatgaag 301 agtagaagtg agtgcagcaa aagacggaca gagcatgtgc tatcgctccc attcgagaac 361 tccccgtttt gcgaattttc tccccgtgtg cgaccttgca acaataccga ggcgttaact 421 gttttcccct ctctctcctc tcaaaactgt ggcatttgaa aatagcgatg ccggaataaa 481 tggccaatt //