LOCUS CO961198 379 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18g04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O44414 O44414 T07A9.11 PROTEIN. [1], mRNA sequence. ACCESSION CO961198 VERSION CO961198.1 GI:51334382 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 379) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Trace considered overall poor quality Seq primer: SL1 primer Sequence considered overall poor quality. FEATURES Location/Qualifiers source 1..379 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gggcgaaggc attgtgactc tgcgcacgcg tatagtgctc aacaatccgc ttctgtgccg 61 cacaccaatg gtcatccaca ttctgcaccc gaaccgaggt tcggtcccca aatcggaggt 121 gcgtgaaaag ctggcaaagc tgtacaagac aactcccgat gtgattgtca cctatgggtt 181 tcgttgccat ttcgggggcg gtcgcaacac tggcttcaca cacgtcaaca atgcactaga 241 ctacaccaaa cgcttcgagc ccaaattcca tctgctcaaa caagggactg gacagaaggt 301 agagaacggc ggtcgtaacc aacgcatcga ccgaaaaaat ccgccaaaga aggtccgcgg 361 cacaaagaaa ggcaaggtc //