LOCUS CO961194 650 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18f12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9SNZ1 Q9SNZ1 UBIQUITIN PRECURSOR, mRNA sequence. ACCESSION CO961194 VERSION CO961194.1 GI:51334378 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 650) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..650 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcctcaacgt tactcctcca aaaagctatc tacaaccaaa atgcaaatct tcgtaaagac 61 tttgactggc aagaccatta ccctggaagt ggagggatcg gacacaatcg agaacgtcaa 121 ggccaagatc caggacaagg agggcattcc gcccgaccaa cagcgtctga tcttcgccgg 181 gaaacagctc gaagacggtc gcacgcttgc ggactacaac attcaaaagg agtccactct 241 ccatttggtg ttgcgtctcc gcggaggaat gcagatcttt gtcaagactc tcactggaaa 301 gaccattacc ctggaagtcg agggttctga caccatcgag aacgtcaagg ccaagatcca 361 ggacaaggaa ggcattccgc cggaccagca gcgtctgatc ttcgccggaa agcagctcga 421 ggacggtcgc acccttgcgg actacaacat ccagaaggaa tccaccctcc atctggtgtt 481 gcgtcttcgc ggtggttccg cctgagtcac agaacgcgca gaggaatatg gcgtcttgag 541 atgtggacca attttaattc ctgttctgat cacacgaaac acaaatccac atgttttacg 601 atatacaata aacagcagaa aacaacctac attcattaag taatcctgct //