LOCUS CO961183 583 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18e09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961183 VERSION CO961183.1 GI:51334367 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 583) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 626 Seq primer: SL1 primer High quality sequence stop: 563. FEATURES Location/Qualifiers source 1..583 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggccgaatt agcctacgaa gccaccactt ttatcatggc tcagacccga aatggcgcac 61 cgatttgtct cgcggcttcc tcgctctctc tatttttngc gtgccagagt tcaaaaatgg 121 tttagacagc aaaaggaggt gaacttcttg gagagacgtt atcggaagct actcaagttg 181 ctattgtcat tgaatgggtc gtatccggat gactactcat tttttaaatt tatgcacaca 241 ttatntgggt gaaatgtatt ttncggcctc ccaacaaacg cctgatagac gaaaccctgc 301 acaaaatgca gacaattgcg aacaattggg ttgggggagg acacgaaatc gcgatcacca 361 ttagccaaat ggttgcgtac gaacaaggcg ctctgagcga agaaggtggc gacgaaggca 421 tcgcagagac aagcggatga atgtggaatt tgcgatcacc gatctgctgc tggaaatgtg 481 tctgatcgga tttgattgac cattgagaga gaatgggtat ggaaaatgaa taataaaatt 541 gcgggagaaa aaaacaaaaa cacaagacta gttctctctc aag //